RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 BRD8Q9H0E9 1235 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 MIR1-1HGQ9H1L0 117 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 KCNF1Q9H3M0 494 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 SUV39H2Q9H5I1 410 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 ATP13A3Q9H7F0 1226 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 NT5MQ9NPB1 228 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 SAE1Q9UBE0 346 aaPredicted RBP18.49■□□□□ 0.55
LITAF-220ENST00000620789 DKK3Q9UBP4 350 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 AMACRQ9UHK6 382 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 EFR3BQ9Y2G0 817 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 LAMA1P25391 3075 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 TSPAN11A1L157 253 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 PATE3B3GLJ2 98 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 AP1G1O43747 822 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 PYGMP11217 842 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 GNSP15586 552 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 CD27P26842 260 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 CETN2P41208 172 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 ABL2P42684 1182 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 MAXP61244 160 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 BCL2L1Q07817 233 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 SF3A2Q15428 464 aaKnown RBP18.48■□□□□ 0.55
LITAF-220ENST00000620789 DUOXA1Q1HG43 343 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 RALGPS1Q5JS13 557 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 TCEAL6Q6IPX3 200 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 NEK5Q6P3R8 708 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 PRR23CQ6ZRP0 262 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 TRIM69Q86WT6 500 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 CAMK1DQ8IU85 385 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 KIAA2013Q8IYS2 634 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 C1orf216Q8TAB5 229 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 P3H4Q92791 437 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 TCEAL3Q969E4 200 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 ALS2CR12Q96Q35 445 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 OSBPL8Q9BZF1 889 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 POLR1EQ9GZS1 481 aaKnown RBP18.48■□□□□ 0.55
LITAF-220ENST00000620789 SCUBE2Q9NQ36 999 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 HAUS2Q9NVX0 235 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 RBM22Q9NW64 420 aaKnown RBP eCLIP18.48■□□□□ 0.55
LITAF-220ENST00000620789 FADS3Q9Y5Q0 445 aa18.48■□□□□ 0.55
LITAF-220ENST00000620789 GON4LQ3T8J9 2241 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.47■□□□□ 0.55
LITAF-220ENST00000620789 A0A1W2PPC4 97 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 TTC24A2A3L6 582 aaPredicted RBP18.47■□□□□ 0.55
LITAF-220ENST00000620789 KCNK1O00180 336 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 KHNYNO15037 678 aaKnown RBP18.47■□□□□ 0.55
LITAF-220ENST00000620789 LATO43561 262 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 NEBLO76041 1014 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 IFI35P80217 286 aaPredicted RBP18.47■□□□□ 0.55
LITAF-220ENST00000620789 AP1B1Q10567 949 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 TRIM61Q5EBN2 209 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 CFAP58Q5T655 872 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 SLC23A3Q6PIS1 610 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 BRAT1Q6PJG6 821 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 ZCCHC9Q8N567 271 aaKnown RBP18.47■□□□□ 0.55
LITAF-220ENST00000620789 C12orf50Q8NA57 414 aaPredicted RBP18.47■□□□□ 0.55
LITAF-220ENST00000620789 HAUS1Q96CS2 278 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 NSMCE3Q96MG7 304 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 ORAI3Q9BRQ5 295 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 HERPUD2Q9BSE4 406 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 EBF2Q9HAK2 575 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 NOD2Q9HC29 1040 aa18.47■□□□□ 0.55
LITAF-220ENST00000620789 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.47■□□□□ 0.55
LITAF-220ENST00000620789 PTPRZ1P23471 2315 aaPredicted RBP18.47■□□□□ 0.55
LITAF-220ENST00000620789 A0A1B0GTW7 788 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 APOC4-APOC2K7ER74 178 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 TRAFD1O14545 582 aaPredicted RBP18.46■□□□□ 0.55
LITAF-220ENST00000620789 RNGTTO60942 597 aaKnown RBP18.46■□□□□ 0.55
LITAF-220ENST00000620789 PCDH8O95206 1070 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 APOC2P02655 101 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 CFIP05156 583 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 SERPINF2P08697 491 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 TIMP2P16035 220 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 ITKQ08881 620 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 ZNF211Q13398 564 aaPredicted RBP18.46■□□□□ 0.55
LITAF-220ENST00000620789 PRKD1Q15139 912 aaPredicted RBP18.46■□□□□ 0.55
LITAF-220ENST00000620789 ALG1LQ6GMV1 187 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 AADACL2Q6P093 401 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 TTC7BQ86TV6 843 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 HORMAD1Q86X24 394 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 ECHDC3Q96DC8 303 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 IL12RB2Q99665 862 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 NUSAP1Q9BXS6 441 aaKnown RBP18.46■□□□□ 0.55
LITAF-220ENST00000620789 SLC6A14Q9UN76 642 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 SLCO1B1Q9Y6L6 691 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 CFAP54Q96N23 3096 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 ANKRD36A6QL64 1941 aa18.46■□□□□ 0.55
LITAF-220ENST00000620789 A0A1W2PQU0 124 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 PRR5-ARHGAP8B1AHC4 643 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 AREL1O15033 823 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 BCAT2O15382 392 aaPredicted RBP18.45■□□□□ 0.54
LITAF-220ENST00000620789 SPINT1O43278 529 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 TSPAN6O43657 245 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 SOCS5O75159 536 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 JCHAINP01591 159 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 HLA-DQB2P05538 268 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 XPAP23025 273 aaPredicted RBP18.45■□□□□ 0.54
LITAF-220ENST00000620789 MAT2AP31153 395 aaKnown RBP18.45■□□□□ 0.54
LITAF-220ENST00000620789 NUDT1P36639 197 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 SUOXP51687 545 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms