RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 INTS6LQ5JSJ4 861 aaKnown RBP11.46□□□□□ -0.58
CLIP1-219ENST00000620786 OR4L1Q8NH43 312 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.58
CLIP1-219ENST00000620786 ZSCAN18Q8TBC5 510 aaPredicted RBP11.46□□□□□ -0.58
CLIP1-219ENST00000620786 DNAJC19Q96DA6 116 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 TMEM216Q9P0N5 145 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 ARL5CA6NH57 179 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 PIGNO95427 931 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 MYBL2P10244 700 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 SLC5A3P53794 718 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 AIF1P55008 147 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 CRHR2Q13324 411 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 KYAT3Q6YP21 454 aaKnown RBP11.46□□□□□ -0.58
CLIP1-219ENST00000620786 IFNL1Q8IU54 200 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 GPR135Q8IZ08 494 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 UPF1Q92900 1129 aaKnown RBP eCLIP11.46□□□□□ -0.58
CLIP1-219ENST00000620786 REXO5Q96IC2 774 aaKnown RBP11.46□□□□□ -0.58
CLIP1-219ENST00000620786 MFSD14AQ96MC6 490 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 RIBC2Q9H4K1 309 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 PDZD7Q9H5P4 517 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 ENOPH1Q9UHY7 261 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF711Q9Y462 761 aa11.46□□□□□ -0.58
CLIP1-219ENST00000620786 SLC28A1O00337 649 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 RPL14P50914 215 aaKnown RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 TRIM32Q13049 653 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 IL17AQ16552 155 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 LRRC38Q5VT99 294 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 SLC9A9Q8IVB4 645 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ALLCQ8N6M5 410 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 MOSPD2Q8NHP6 518 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 OXNAD1Q96HP4 312 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 RNF145Q96MT1 663 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 INPP4AQ96PE3 977 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 LGMNQ99538 433 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 SIKE1Q9BRV8 207 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 SLC24A3Q9HC58 644 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 MAPRE3Q9UPY8 281 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 CD3EAPO15446 510 aaKnown RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 PEX1O43933 1283 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 MLYCDO95822 493 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ADRA1DP25100 572 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 CDK16Q00536 496 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 FMO1Q01740 532 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 UBXN2BQ14CS0 331 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 SLC25A52Q3SY17 297 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ATP13A4Q4VNC1 1196 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 DGKKQ5KSL6 1271 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 TCHHL1Q5QJ38 904 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ZDHHC20Q5W0Z9 365 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 NEK10Q6ZWH5 1172 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 NRSN1Q8IZ57 195 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 RBFAQ8N0V3 343 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 COPS8Q99627 209 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 HSD17B14Q9BPX1 270 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 KLHL4Q9C0H6 718 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 SLITRK2Q9H156 845 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF780BQ9Y6R6 833 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 AOC2O75106 756 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 C1RP00736 705 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 FGF1P05230 155 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 NUP62P37198 522 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 NOMO3P69849 1222 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ELP6Q0PNE2 266 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 GRSF1Q12849 480 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 FRG1Q14331 258 aaKnown RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 TMC3Q7Z5M5 1100 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 NETO2Q8NC67 525 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ITFG1Q8TB96 612 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 C11orf84Q9BUA3 381 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-219ENST00000620786 VAV3Q9UKW4 847 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ADGRA3Q8IWK6 1321 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 LRRC74BQ6ZQY2 392 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 HEXDCQ8WVB3 486 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 BDH2Q9BUT1 245 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 MAT2BQ9NZL9 334 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 SYN3O14994 580 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 STBD1O95210 358 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 NTRK1P04629 796 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 LBPP18428 481 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 ZACNQ401N2 412 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 MYCBPAPQ8TBZ2 947 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 RNFT2Q96EX2 444 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 LINGO1Q96FE5 620 aa11.45□□□□□ -0.58
CLIP1-219ENST00000620786 CCNE2O96020 404 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 VIPP01282 170 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 FLT3P36888 993 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 ST3GAL1Q11201 340 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 STX4Q12846 297 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 OTUD3Q5T2D3 398 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-219ENST00000620786 BHLHB9Q6PI77 547 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 SRLQ86TD4 932 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 ADGRG2Q8IZP9 1017 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 BEND7Q8N7W2 519 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-219ENST00000620786 PRRG4Q9BZD6 226 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 KLF15Q9UIH9 416 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 COQ6Q9Y2Z9 468 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 TRBV23OR9-2A0A075B6M9 112 aa11.44□□□□□ -0.58
CLIP1-219ENST00000620786 LINC00854A0A1B0GVQ3 168 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms