RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CACNG3O60359 315 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 NELFEP18615 380 aaKnown RBP20.59■□□□□ 0.89
NEK3-208ENST00000618534 KCNA5P22460 613 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 ATP5F1P24539 256 aaPredicted RBP20.59■□□□□ 0.89
NEK3-208ENST00000618534 C1QTNF8P60827 252 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 IKBKEQ14164 716 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 FASTKQ14296 549 aaKnown RBP20.59■□□□□ 0.89
NEK3-208ENST00000618534 AGKQ53H12 422 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 ZNF470Q6ECI4 717 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 DENND5AQ6IQ26 1287 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 FAM35AQ86V20 835 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 KLHDC8BQ8IXV7 354 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 OR6J1Q8NGC5 347 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 LPGAT1Q92604 370 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 SLCO4A1Q96BD0 722 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 TRPV6Q9H1D0 765 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 CNGB3Q9NQW8 809 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 CCDC167Q9P0B6 97 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 FNDC1Q4ZHG4 1894 aaPredicted RBP20.59■□□□□ 0.89
NEK3-208ENST00000618534 ARHGEF37A1IGU5 675 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 HEATR9A2RTY3 570 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 PRORSD1PA6NEY8 169 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 GABRDO14764 452 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 AURKAO14965 403 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 DNAJB13P59910 316 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 HPCAP84074 193 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 RHDQ02161 417 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 PPIL2Q13356 520 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 CSHL1Q14406 222 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 MTX3Q5HYI7 312 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 OLFML2BQ68BL8 750 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 PPHLN1Q8NEY8 458 aaKnown RBP20.58■□□□□ 0.89
NEK3-208ENST00000618534 TSPAN14Q8NG11 270 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 DCPSQ96C86 337 aaKnown RBP20.58■□□□□ 0.89
NEK3-208ENST00000618534 ZNF512Q96ME7 567 aaPredicted RBP20.58■□□□□ 0.89
NEK3-208ENST00000618534 CHST12Q9NRB3 414 aa20.58■□□□□ 0.89
NEK3-208ENST00000618534 AAR2Q9Y312 384 aaKnown RBP20.58■□□□□ 0.89
NEK3-208ENST00000618534 CDH2P19022 906 aaPredicted RBP20.58■□□□□ 0.88
NEK3-208ENST00000618534 CD151P48509 253 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 POLD2P49005 469 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 CXCR3P49682 368 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 TXNL4AP83876 142 aaKnown RBP20.58■□□□□ 0.88
NEK3-208ENST00000618534 STX5Q13190 355 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 RWDD4Q6NW29 188 aaKnown RBP20.58■□□□□ 0.88
NEK3-208ENST00000618534 CYP2R1Q6VVX0 501 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 BHLHA9Q7RTU4 235 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 TSGA13Q96PP4 275 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 IGSF5Q9NSI5 407 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 SNX13Q9Y5W8 968 aa20.58■□□□□ 0.88
NEK3-208ENST00000618534 A0A087X1B8 175 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 RRN3P2A6NIE6 340 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 PSMD12O00232 456 aaPredicted RBP20.57■□□□□ 0.88
NEK3-208ENST00000618534 HOXD8P13378 290 aaPredicted RBP20.57■□□□□ 0.88
NEK3-208ENST00000618534 EPHX2P34913 555 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 SQLEQ14534 574 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 RBM20Q5T481 1227 aaKnown RBP20.57■□□□□ 0.88
NEK3-208ENST00000618534 RNF135Q8IUD6 432 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 HERC6Q8IVU3 1022 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 PCED1BQ96HM7 432 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 CCT7Q99832 543 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 SARDHQ9UL12 918 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 TCAF1Q9Y4C2 921 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 IPPQ9Y573 584 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 MYBPHLA2RUH7 354 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 UBDO15205 165 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 CDK4P11802 303 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 SNX17Q15036 470 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 LAYNQ6UX15 382 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 CARM1Q86X55 608 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 MYO1HQ8N1T3 1032 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 C2CD4AQ8NCU7 369 aaPredicted RBP20.57■□□□□ 0.88
NEK3-208ENST00000618534 DNAJB3Q8WWF6 145 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 TOP1MTQ969P6 601 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 SLC29A1Q99808 456 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 MEAF6Q9HAF1 191 aa20.57■□□□□ 0.88
NEK3-208ENST00000618534 MRPL40Q9NQ50 206 aaKnown RBP20.57■□□□□ 0.88
NEK3-208ENST00000618534 TIMM13Q9Y5L4 95 aaPredicted RBP20.57■□□□□ 0.88
NEK3-208ENST00000618534 H0YJX3 145 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 SMIM10L2AP0DMW4 78 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 SMIM10L2BP0DMW5 78 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 CPB1P15086 417 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 CHRNA4P43681 627 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 PLK1P53350 603 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 SLC12A2P55011 1212 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 COG7P83436 770 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 MAPRE2Q15555 327 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 ADRM1Q16186 407 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 TECRLQ5HYJ1 363 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 RAB41Q5JT25 222 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 PM20D1Q6GTS8 502 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 FASTKD5Q7L8L6 764 aaKnown RBP20.56■□□□□ 0.88
NEK3-208ENST00000618534 KDELC2Q7Z4H8 507 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 TAC4Q86UU9 113 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 NUP93Q8N1F7 819 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 GRIN3AQ8TCU5 1115 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 CIB1Q99828 191 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 OSBPL11Q9BXB4 747 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 RHOBTB2Q9BYZ6 727 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 GLOD4Q9HC38 313 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 SPAG4Q9NPE6 437 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms