RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 DPY19L2P1Q6NXN4 242 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 OLFML1Q6UWY5 402 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 RBM43Q6ZSC3 357 aaKnown RBP8.72□□□□□ -1.01
GPC6-202ENST00000617456 Q6ZVU0 165 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 C11orf96Q7Z7L8 435 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 C3orf20Q8ND61 904 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 ANKK1Q8NFD2 765 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 OR13H1Q8NG92 308 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 IFI44Q8TCB0 444 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 MAGEC3Q8TD91 643 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 FRS2Q8WU20 508 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 FAM131CQ96AQ9 280 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 APOLD1Q96LR9 279 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 PHF12Q96QT6 1004 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 CPXM1Q96SM3 734 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 NAA15Q9BXJ9 866 aaKnown RBP8.72□□□□□ -1.01
GPC6-202ENST00000617456 DPH1Q9BZG8 443 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 SIX2Q9NPC8 291 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 STAP1Q9ULZ2 295 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 TBC1D30Q9Y2I9 924 aa8.72□□□□□ -1.01
GPC6-202ENST00000617456 AHCTF1Q8WYP5 2266 aa8.71□□□□□ -1.01
GPC6-202ENST00000617456 LY6G6EA0A0G2JKS1 128 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 PMS2P1A4D2B8 440 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 LRRC10BA6NIK2 292 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 GOLGA6L19H0YKK7 550 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 K7ENP7 123 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 K7ESM1 405 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 DAB1O75553 588 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 GIMD1P0DJR0 217 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 UCHL3P15374 230 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 CYP11B1P15538 503 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 TGM2P21980 687 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 AKT2P31751 481 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 CXCR3P49682 368 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 DUSP3P51452 185 aaPredicted RBP8.71□□□□□ -1.02
GPC6-202ENST00000617456 CDH4P55283 916 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 TAS2R38P59533 333 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 DLG2Q15700 870 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 CNGA3Q16281 694 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 FXNQ16595 210 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 CDKN3Q16667 212 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 ISXQ2M1V0 245 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 SLC25A52Q3SY17 297 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 TCP11X2Q5H9J9 407 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 C6orf132Q5T0Z8 1188 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 INO80CQ6PI98 192 aaPredicted RBP8.71□□□□□ -1.02
GPC6-202ENST00000617456 CRTC1Q6UUV9 634 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 ZNF783Q6ZMS7 281 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 CCDC81Q6ZN84 652 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 SETD3Q86TU7 594 aaPredicted RBP8.71□□□□□ -1.02
GPC6-202ENST00000617456 SLC47A2Q86VL8 602 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 DEFB106AQ8N104 65 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 TMEM145Q8NBT3 493 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 ARRDC3Q96B67 414 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 C18orf8Q96DM3 657 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 ATXN7L3BQ96GX2 97 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 HAPLN3Q96S86 360 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 NPY6RQ99463 290 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 BRD8Q9H0E9 1235 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 WDCPQ9H6R7 721 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 SYNCQ9H7C4 482 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 FAM204AQ9H8W3 233 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 PREBQ9HCU5 417 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 EVA1BQ9NVM1 165 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 DDIT4Q9NX09 232 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 DNAJC28Q9NX36 388 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 ARHGEF38Q9NXL2 777 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 TUBA8Q9NY65 449 aaPredicted RBP8.71□□□□□ -1.02
GPC6-202ENST00000617456 NLGN3Q9NZ94 848 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 ZMAT5Q9UDW3 170 aaKnown RBP8.71□□□□□ -1.02
GPC6-202ENST00000617456 SLC25A13Q9UJS0 675 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 ACAD8Q9UKU7 415 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 N6AMT1Q9Y5N5 214 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 U3KQA8 63 aa8.71□□□□□ -1.02
GPC6-202ENST00000617456 DOPEY2Q9Y3R5 2298 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 IGLV3-10A0A075B6K4 115 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 SYNJ2BP-COX16A0A087WUM0 186 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 A0A1W2PNU3 283 aaPredicted RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 NEMP2A6NFY4 417 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 DRGXA6NNA5 263 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 CHUKO15111 745 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 SCAMP1O15126 338 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 ATP9BO43861 1147 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 ENDOD1O94919 500 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 PYGLP06737 847 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 GP1BAP07359 652 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 IDO1P14902 403 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 ENPP1P22413 925 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 HNRNPA2B1P22626 353 aaKnown RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 HNRNPH1P31943 449 aaKnown RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 ABL2P42684 1182 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 CSRP3P50461 194 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 CLCN6P51797 869 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 KRT83P78385 493 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 NFKB2Q00653 900 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 ZNF177Q13360 481 aaPredicted RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 AUHQ13825 339 aaKnown RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 DRAP1Q14919 205 aaPredicted RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 KIF26BQ2KJY2 2108 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms