RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ZNF840PA6NDX5 716 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 K7ESF4 209 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 TRIM24O15164 1050 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 COCHO43405 550 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 OLFM2O95897 454 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 TBX18O95935 607 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 OAS1P00973 400 aaKnown RBP4.81□□□□□ -1.64
CUL3-216ENST00000617432 MYL1P05976 194 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 IRF1P10914 325 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 NAT1P18440 290 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 ANXA13P27216 316 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 ATICP31939 592 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 PSMC2P35998 433 aaKnown RBP4.81□□□□□ -1.64
CUL3-216ENST00000617432 AVPR1AP37288 418 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 FNTBP49356 437 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 MXI1P50539 228 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 RUNX3Q13761 415 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 MORC3Q14149 939 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 NFIL3Q16649 462 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 ARHGAP29Q52LW3 1261 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 TTI2Q6NXR4 508 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 C4orf50Q6ZRC1 276 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 CLEC20AQ6ZU45 233 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 ARHGEF19Q8IW93 802 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 CELF5Q8N6W0 485 aaKnown RBP4.81□□□□□ -1.64
CUL3-216ENST00000617432 SLC4A11Q8NBS3 891 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 SPATA18Q8TC71 538 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 CSGALNACT1Q8TDX6 532 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 TMEM174Q8WUU8 243 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 SMARCE1Q969G3 411 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 FBXO32Q969P5 355 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 SLC35C1Q96A29 364 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 SPATA17Q96L03 361 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 C8orf48Q96LL4 319 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 ZSWIM1Q9BR11 485 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 TTLL2Q9BWV7 592 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 TMEM8AQ9HCN3 771 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 PRMT8Q9NR22 394 aaPredicted RBP4.81□□□□□ -1.64
CUL3-216ENST00000617432 TDP1Q9NUW8 608 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 CGNQ9P2M7 1197 aaKnown RBP4.81□□□□□ -1.64
CUL3-216ENST00000617432 RNF7Q9UBF6 113 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 AJAP1Q9UKB5 411 aaPredicted RBP4.81□□□□□ -1.64
CUL3-216ENST00000617432 ATP6V1DQ9Y5K8 247 aa4.81□□□□□ -1.64
CUL3-216ENST00000617432 ZNF638Q14966 1978 aaKnown RBP4.81□□□□□ -1.64
CUL3-216ENST00000617432 CCDC66A2RUB6 948 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 GOLGA6L4A6NEF3 574 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 ZNF561-AS1K7EIQ3 104 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 SCDO00767 359 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 MAPK13O15264 365 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 MFAP3LO75121 409 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 FGF19O95750 216 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 CYP17A1P05093 508 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 EPB41P11171 864 aaKnown RBP4.8□□□□□ -1.64
CUL3-216ENST00000617432 MBL2P11226 248 aaPredicted RBP4.8□□□□□ -1.64
CUL3-216ENST00000617432 KRT13P13646 458 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 HNRNPLP14866 589 aaKnown RBP eCLIP4.8□□□□□ -1.64
CUL3-216ENST00000617432 HOXB6P17509 224 aaKnown RBP4.8□□□□□ -1.64
CUL3-216ENST00000617432 HDCP19113 662 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 OPRD1P41143 372 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 RAD23BP54727 409 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 KDSRQ06136 332 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 INCA1Q0VD86 236 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 SMARCB1Q12824 385 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 ACAP1Q15027 740 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 CCDC6Q16204 474 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 SGSM1Q2NKQ1 1148 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 ERCC6LQ2NKX8 1250 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 EDRF1Q3B7T1 1238 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 ITPRIPL2Q3MIP1 535 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 C1QL3Q5VWW1 255 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 GJB7Q6PEY0 223 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 VSTM1Q6UX27 236 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 INTS8Q75QN2 995 aaKnown RBP4.8□□□□□ -1.64
CUL3-216ENST00000617432 SCD5Q86SK9 330 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 TTC30AQ86WT1 665 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 BBS7Q8IWZ6 715 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 NUP93Q8N1F7 819 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 UBR7Q8N806 425 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 SUMF1Q8NBK3 374 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 CALML6Q8TD86 181 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 OSCP1Q8WVF1 389 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 NELFBQ8WX92 580 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 NKD2Q969F2 451 aaPredicted RBP4.8□□□□□ -1.64
CUL3-216ENST00000617432 CCDC47Q96A33 483 aaKnown RBP4.8□□□□□ -1.64
CUL3-216ENST00000617432 SMARCD1Q96GM5 515 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 GBP4Q96PP9 640 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 GPR88Q9GZN0 384 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 ECT2Q9H8V3 914 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 SMURF1Q9HCE7 757 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 DMAP1Q9NPF5 467 aaPredicted RBP4.8□□□□□ -1.64
CUL3-216ENST00000617432 ACP6Q9NPH0 428 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 TRPV5Q9NQA5 729 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 CISHQ9NSE2 258 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 RAB20Q9NX57 234 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 DUS2Q9NX74 493 aaKnown RBP4.8□□□□□ -1.64
CUL3-216ENST00000617432 OBP2AQ9NY56 170 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 CFAP97Q9P2B7 532 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 ARHGAP26Q9UNA1 814 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 FANCMQ8IYD8 2048 aa4.8□□□□□ -1.64
CUL3-216ENST00000617432 CETN3O15182 167 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms