RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CLUP10909 449 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 FBLP22087 321 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 DYNLT1P63172 113 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 FAM214AQ32MH5 1076 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 THUMPD3Q9BV44 507 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TMEM8AQ9HCN3 771 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PTPRFP10586 1907 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 A0A1B0GVM2 712 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TCAF2A6NFQ2 919 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CYP11B2P19099 503 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CHRM3P20309 590 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ARCN1P48444 511 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 KCNC1P48547 511 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RPS21P63220 83 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 FAM153CQ494X1 144 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 LRIF1Q5T3J3 769 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KIAA0930Q6ICG6 404 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TARS2Q9BW92 718 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TMEM184CQ9NVA4 438 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KLK14Q9P0G3 267 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CDC23Q9UJX2 597 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 COL4A4P53420 1690 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TSPAN12O95859 305 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PLTPP55058 493 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PCSK7Q16549 785 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 FLYWCH1Q4VC44 716 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RBM44Q6ZP01 1051 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 C1orf131Q8NDD1 294 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 GPT2Q8TD30 523 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MAML1Q92585 1016 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PROX1Q92786 737 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 GFM2Q969S9 779 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 MYO19Q96H55 970 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CNDP2Q96KP4 475 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 JMJD8Q96S16 334 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 NTPCRQ9BSD7 190 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 RSPH9Q9H1X1 276 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TBC1D17Q9HA65 648 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 POLHQ9Y253 713 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RUVBL1Q9Y265 456 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 PCDHB15Q9Y5E8 787 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 INSL5Q9Y5Q6 135 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 GOLGA8KD6RF30 607 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MASP2O00187 686 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PABPC4LP0CB38 370 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 RARGP13631 454 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SLC8A1P32418 973 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CLCN7P51798 805 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 AFF3P51826 1226 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 CAMK1Q14012 370 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MYBPC2Q14324 1141 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.38□□□□□ -1.87
LPP-220ENST00000617246 TMEM143Q96AN5 459 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 LMLNQ96KR4 655 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RILPQ96NA2 401 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SH2D7A6NKC9 451 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 FAM170BA6NMN3 283 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SLC16A4O15374 487 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MATN4O95460 622 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MMP1P03956 469 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PCNAP12004 261 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 HPCAL1P37235 193 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 LIFRP42702 1097 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TKTL1P51854 596 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CACNA2D1P54289 1103 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TEKQ02763 1124 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CES4AQ5XG92 561 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 FAM220AQ7Z4H9 259 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PARGQ86W56 976 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ADGRG2Q8IZP9 1017 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TOX2Q96NM4 488 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KLHL25Q9H0H3 589 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MTRRQ9UBK8 725 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ENOPH1Q9UHY7 261 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 A0A1B0GTH6 734 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 E9PAM4 449 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SLC16A3O15427 465 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 ZNF131P52739 623 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 TRIM28Q13263 835 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TRIM40Q6P9F5 258 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 HNRNPABQ99729 332 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TWSG1Q9GZX9 223 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 PCBD2Q9H0N5 130 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ADAM22Q9P0K1 906 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CORO2BQ9UQ03 480 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 MRPS2Q9Y399 296 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 TICRRQ7Z2Z1 1910 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 CSF2RAP15509 400 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 DCST1Q5T197 706 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 BRSK2Q8IWQ3 736 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 DYNLL2Q96FJ2 89 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SERPINB12Q96P63 405 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 HIST1H2AAQ96QV6 131 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ADAMTS10Q9H324 1103 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RMND5AQ9H871 391 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 DDIT4Q9NX09 232 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 CLDN11O75508 207 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 KLRK1P26718 216 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 STXBP1P61764 594 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms