RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CCL16O15467 120 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CDH16O75309 829 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 HOXC6P09630 235 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CLCN7P51798 805 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 HYIQ5T013 277 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CHSY3Q70JA7 882 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 HAPLN3Q96S86 360 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 KCND2Q9NZV8 630 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 TMPRSS11EQ9UL52 423 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ENO4A6NNW6 628 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ENTPD5O75356 428 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CDC25CP30307 473 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 BNIP2Q12982 314 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 PDK2Q15119 407 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 AGBL3Q8NEM8 1001 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ACAT2Q9BWD1 397 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 TM6SF2Q9BZW4 377 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 COG5Q9UP83 839 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 HSPA12AO43301 675 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 AHCYP23526 432 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ACTR1AP61163 376 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 FAM187BQ17R55 369 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 SLC30A6Q6NXT4 461 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 OTOP2Q7RTS6 562 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 OR7D4Q8NG98 312 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 BDH2Q9BUT1 245 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 FTHL17Q9BXU8 183 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ATG10Q9H0Y0 220 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 AMACRQ9UHK6 382 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 SNX7Q9UNH6 387 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 HEG1Q9ULI3 1381 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ECHS1P30084 290 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 SSR2P43308 183 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 RAP1GAPP47736 663 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 NPTX2P47972 431 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 PCDH1Q08174 1060 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 TRAF3Q13114 568 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CRY2Q49AN0 593 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 C9orf64Q5T6V5 341 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ZNF607Q96SK3 696 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 UGT2B28Q9BY64 529 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ESYT3A0FGR9 886 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 SERPINB7O75635 380 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CHST15Q7LFX5 561 aaPredicted RBP12.73□□□□□ -0.37
TCF4-248ENST00000616053 SETD9Q8NE22 299 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 ZDHHC15Q96MV8 337 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 PGRMC2O15173 223 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 WFS1O76024 890 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MAPK8P45983 427 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 PGDP52209 483 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 UGT2B15P54855 530 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 KCNJ2P63252 427 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 TBC1D16Q8TBP0 767 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 Q96MT0 163 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 TLR7Q9NYK1 1049 aaKnown RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 KLQ9UEF7 1012 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 TPRKBQ9Y3C4 175 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 DNMT3AQ9Y6K1 912 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 DPPA5A6NC42 116 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 PSMD11O00231 422 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 NOS1APO75052 506 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 CPNE6O95741 557 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 PLEKP08567 350 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 IDSP22304 550 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 FMO5P49326 533 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 CDC42P60953 191 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 CAMK2DQ13557 499 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 LSM12Q3MHD2 195 aaKnown RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 SLC9B1Q4ZJI4 515 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 C16orf46Q6P387 395 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 NMRAL1Q9HBL8 299 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 SEMA3GQ9NS98 782 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 NR2E1Q9Y466 385 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 CYP1A1P04798 512 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 PRLRP16471 622 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 ABATP80404 500 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 ADIGQ0VDE8 80 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 HLFQ16534 295 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 CCDC153Q494R4 210 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MLIPQ5VWP3 458 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 AVL9Q8NBF6 648 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MCMBPQ9BTE3 642 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 TMEM27Q9HBJ8 222 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 GMPPBQ9Y5P6 360 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 PTPRJQ12913 1337 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 DDNO94850 711 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 FAM58BPP0C7Q3 252 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 IDH2P48735 452 aaKnown RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 SLC13A2Q13183 592 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 INO80DQ53TQ3 878 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 TDRD5Q8NAT2 981 aaKnown RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 GSDMCQ9BYG8 508 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 ATPIF1Q9UII2 106 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 ASNA1O43681 348 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms