RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	EME2	A4GXA9	379 aa	Predicted RBP	11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	LGALS16	A8MUM7	142 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	BUB1	O43683	1085 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	USP12	O75317	370 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	CS	O75390	466 aa	Known RBP	11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	GJB6	O95452	261 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	IGSF6	O95976	241 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	TIMP2	P16035	220 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	EPHB2	P29323	1055 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	IGFALS	P35858	605 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	THOP1	P52888	689 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	COPB1	P53618	953 aa	Known RBP	11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	PCBP4	P57723	403 aa	Known RBP	11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	RAD51	Q06609	339 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	SERINC3	Q13530	473 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	SYCP1	Q15431	976 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	ISX	Q2M1V0	245 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	EFHC2	Q5JST6	749 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	MACC1	Q6ZN28	852 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	PHLDB2	Q86SQ0	1253 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	TTC7B	Q86TV6	843 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	SPACA3	Q8IXA5	215 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	MAPK15	Q8TD08	544 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	FCRL3	Q96P31	734 aa	Predicted RBP	11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	EPAS1	Q99814	870 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	CNPY3	Q9BT09	278 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	SELENOO	Q9BVL4	669 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	ABCG4	Q9H172	646 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	ASCL3	Q9NQ33	180 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	LMBRD1	Q9NUN5	540 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	DONSON	Q9NYP3	566 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	SPAST	Q9UBP0	616 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	SSUH2	Q9Y2M2	353 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	ASH1L	Q9NR48	2969 aa	Known RBP	11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	SETX	Q7Z333	2677 aa	Known RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	ANKRD62	A6NC57	917 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	EIF4E1B	A6NMX2	242 aa	Known RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	EIF3CL	B5ME19	914 aa	Known RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	RASA4B	C9J798	803 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	FGF10	O15520	208 aa	Predicted RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	RASA4	O43374	803 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	GCAT	O75600	419 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	TCEA3	O75764	348 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	TM7SF2	O76062	418 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	MPO	P05164	745 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	MYF5	P13349	255 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	TGM2	P21980	687 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	RPIA	P49247	311 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	PEX5	P50542	639 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	UCN	P55089	124 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	RHOA	P61586	193 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	GABRE	P78334	506 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	GRM3	Q14832	879 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	AGER	Q15109	404 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	NR0B2	Q15466	257 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	TMEM52B	Q4KMG9	183 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	C6orf132	Q5T0Z8	1188 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	DNAJC24	Q6P3W2	148 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	GUSBP11	Q6P575	273 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	LVRN	Q6Q4G3	990 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	LEKR1	Q6ZMV7	388 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	APTX	Q7Z2E3	356 aa	Known RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	GPR155	Q7Z3F1	870 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	PYROXD2	Q8N2H3	581 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	SDR16C5	Q8N3Y7	309 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	NEK11	Q8NG66	645 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	WDR48	Q8TAF3	677 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	LMX1A	Q8TE12	382 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	SNRNP27	Q8WVK2	155 aa	Known RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	NAT6	Q93015	286 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	HMCES	Q96FZ2	354 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	VCPIP1	Q96JH7	1222 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	ZNF641	Q96N77	438 aa	Predicted RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	EIF3C	Q99613	913 aa	Known RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	IL12RB2	Q99665	862 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	AGPAT1	Q99943	283 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	LRRC61	Q9BV99	259 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	DPH1	Q9BZG8	443 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	KLC2	Q9H0B6	622 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	CATSPERB	Q9H7T0	1116 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	PDF	Q9HBH1	243 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	LHX3	Q9UBR4	397 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	APOBEC3B	Q9UH17	382 aa	Known RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	FZD10	Q9ULW2	581 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	PCDHGA8	Q9Y5G5	932 aa		11.26	□□□□□ -0.61
CBWD1-222	ENST00000613508	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	TENM4	Q6N022	2769 aa		11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	TDRD6	O60522	2096 aa	Known RBP	11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	TMEM110-MUSTN1	A8MSY1	372 aa		11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	CCP110	O43303	1012 aa		11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	MMP20	O60882	483 aa		11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	EIF4A3	P38919	411 aa	Known RBP	11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	MLLT3	P42568	568 aa	Predicted RBP	11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	NDST2	P52849	883 aa		11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	RPL7A	P62424	266 aa	Known RBP	11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	SKOR1	P84550	965 aa		11.25	□□□□□ -0.61
CBWD1-222	ENST00000613508	MYL5	Q02045	173 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms