RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 XRCC4Q13426 336 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 NOMO1Q15155 1222 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 RALGPS1Q5JS13 557 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 ZNF569Q5MCW4 686 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 SYCP2LQ5T4T6 812 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 KIAA0895LQ68EN5 471 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 CYP2U1Q7Z449 544 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 TTC7BQ86TV6 843 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 RGL4Q8IZJ4 473 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 DCLK2Q8N568 766 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 CNTD1Q8N815 330 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 ACTL9Q8TC94 416 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 RUBCNQ92622 972 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 PIGKQ92643 395 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 BIRC7Q96CA5 298 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 SEMA3CQ99985 751 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 POLR1EQ9GZS1 481 aaKnown RBP16.79■□□□□ 0.28
IRF1-211ENST00000613424 TMEM74BQ9NUR3 256 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 ATP8A1Q9Y2Q0 1164 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 PCDHGC4Q9Y5F7 938 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 PCDHGA5Q9Y5G8 931 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.79■□□□□ 0.28
IRF1-211ENST00000613424 GON4LQ3T8J9 2241 aa16.79■□□□□ 0.28
IRF1-211ENST00000613424 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.78■□□□□ 0.28
IRF1-211ENST00000613424 TCRBV7S2A1N4TA0A589 114 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 MEI4A8MW99 385 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 H7C0C1 242 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 TRAFD1O14545 582 aaPredicted RBP16.78■□□□□ 0.28
IRF1-211ENST00000613424 IGHV4-34P06331 123 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 CES1P23141 567 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 ABL2P42684 1182 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 ATP5OP48047 213 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 KLF1Q13351 362 aaPredicted RBP16.78■□□□□ 0.28
IRF1-211ENST00000613424 TEX44Q53QW1 395 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 WDR45BQ5MNZ6 344 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 SEL1L2Q5TEA6 688 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 ALG1LQ6GMV1 187 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 SYT12Q8IV01 421 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.78■□□□□ 0.28
IRF1-211ENST00000613424 DNASE2BQ8WZ79 361 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 RAB7BQ96AH8 199 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 QKIQ96PU8 341 aaKnown RBP eCLIP16.78■□□□□ 0.28
IRF1-211ENST00000613424 FAM118BQ9BPY3 351 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 HINFPQ9BQA5 517 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 CEP41Q9BYV8 373 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 CARD9Q9H257 536 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 HAUS2Q9NVX0 235 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 PILRBQ9UKJ0 227 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.78■□□□□ 0.28
IRF1-211ENST00000613424 TTLL3Q9Y4R7 772 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 FADS3Q9Y5Q0 445 aa16.78■□□□□ 0.28
IRF1-211ENST00000613424 TNRC6BQ9UPQ9 1833 aaKnown RBP16.77■□□□□ 0.28
IRF1-211ENST00000613424 TSPAN11A1L157 253 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 GOLGA6L9A6NEM1 432 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 ENC1O14682 589 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 AP1G1O43747 822 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 ITIH2P19823 946 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 PTPN3P26045 913 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 MPLP40238 635 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 CCR5P51681 352 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 EIF3EP60228 445 aaKnown RBP16.77■□□□□ 0.28
IRF1-211ENST00000613424 DSC2Q02487 901 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 NIPAL4Q0D2K0 466 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 SPEM2Q0P670 501 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 IHHQ14623 411 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 CCDC6Q16204 474 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 SLC45A4Q5BKX6 768 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 NEK5Q6P3R8 708 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 BRAT1Q6PJG6 821 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 ALYREFQ86V81 257 aaKnown RBP16.77■□□□□ 0.28
IRF1-211ENST00000613424 ZSWIM9Q86XI8 627 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 SLC35F6Q8N357 371 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 ARRDC2Q8TBH0 407 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 SNX19Q92543 992 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 ECHDC3Q96DC8 303 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 AGAP3Q96P47 875 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 C10orf88Q9H8K7 445 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 EBF2Q9HAK2 575 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 PREBQ9HCU5 417 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 EIF2B4Q9UI10 523 aaKnown RBP16.77■□□□□ 0.28
IRF1-211ENST00000613424 JRKLQ9Y4A0 524 aa16.77■□□□□ 0.28
IRF1-211ENST00000613424 OTOGLQ3ZCN5 2332 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 ANKRD36A6QL64 1941 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 WDR87Q6ZQQ6 2873 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 ATXN2Q99700 1313 aaKnown RBP16.76■□□□□ 0.27
IRF1-211ENST00000613424 SPINT1O43278 529 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 HTRA2O43464 458 aaPredicted RBP16.76■□□□□ 0.27
IRF1-211ENST00000613424 KIF5CO60282 957 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 RNGTTO60942 597 aaKnown RBP16.76■□□□□ 0.27
IRF1-211ENST00000613424 PCDH8O95206 1070 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 RBP3P10745 1247 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 TGM1P22735 817 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 RBL1P28749 1068 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 PPP2CBP62714 309 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 PPP2CAP67775 309 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 WASHC5Q12768 1159 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 UGP2Q16851 508 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 LRRC73Q5JTD7 316 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 PLA2G2CQ5R387 149 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 CFAP58Q5T655 872 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms