RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 DDA1Q9BW61 102 aa10.43□□□□□ -0.74
SSX3-204ENST00000612497 INTS2Q9H0H0 1204 aaKnown RBP10.43□□□□□ -0.74
SSX3-204ENST00000612497 ZSCAN16Q9H4T2 348 aaPredicted RBP10.43□□□□□ -0.74
SSX3-204ENST00000612497 ZDHHC6Q9H6R6 413 aa10.43□□□□□ -0.74
SSX3-204ENST00000612497 MBNL1Q9NR56 388 aaKnown RBP10.43□□□□□ -0.74
SSX3-204ENST00000612497 SLC39A1Q9NY26 324 aa10.43□□□□□ -0.74
SSX3-204ENST00000612497 TRAF3IP3Q9Y228 551 aa10.43□□□□□ -0.74
SSX3-204ENST00000612497 CSMD1Q96PZ7 3565 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 CELSR1Q9NYQ6 3014 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 IGHV5-10-1A0A0J9YXX1 117 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 LOC101059948A0A1B0GTJ6 334 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 C16orf96A6NNT2 1141 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 TMEM110-MUSTN1A8MSY1 372 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 B4DGG1 531 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 B4GAT1O43505 415 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 KLRC4O43908 158 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 STX10O60499 249 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 MMP20O60882 483 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 ZNF821O75541 412 aaPredicted RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 TM7SF2O76062 418 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 ADCY5O95622 1261 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 TNFP01375 233 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 IGLV3-25P01717 112 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 PAEPP09466 180 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 TCN2P20062 427 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 RPL13P26373 211 aaKnown RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 HTR1BP28222 390 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 ALDH4A1P30038 563 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 CCR1P32246 355 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 CCNHP51946 323 aaPredicted RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 CDH4P55283 916 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 SRP54P61011 504 aaKnown RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 B4GALNT1Q00973 533 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 EIF2S3LQ2VIR3 472 aaKnown RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 C14orf28Q4W4Y0 310 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 CARD16Q5EG05 197 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 TAF8Q7Z7C8 310 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 NRSN1Q8IZ57 195 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 NLGN4XQ8N0W4 816 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 RYBPQ8N488 228 aaPredicted RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 DCAF4L2Q8NA75 395 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 LINC00301Q8NCQ3 95 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 AGBL5Q8NDL9 886 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 NLGN4YQ8NFZ3 816 aaPredicted RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 STARD8Q92502 1023 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 ARHGEF26Q96DR7 871 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 CCDC74BQ96LY2 380 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 ZSWIM1Q9BR11 485 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 NUDT22Q9BRQ3 303 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 ASPSCR1Q9BZE9 553 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 POPDC2Q9HBU9 364 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 DDIT4Q9NX09 232 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 KLQ9UEF7 1012 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 KCTD3Q9Y597 815 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 ADGRG4Q8IZF6 3080 aa10.42□□□□□ -0.74
SSX3-204ENST00000612497 TNRC6AQ8NDV7 1962 aaKnown RBP10.42□□□□□ -0.74
SSX3-204ENST00000612497 A0A0D9SEW6 157 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 NUDT21O43809 227 aaKnown RBP10.41□□□□□ -0.74
SSX3-204ENST00000612497 CUTAO60888 179 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 CALCAP01258 141 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 MAP4P27816 1152 aaKnown RBP10.41□□□□□ -0.74
SSX3-204ENST00000612497 CSTF2P33240 577 aaKnown RBP eCLIP10.41□□□□□ -0.74
SSX3-204ENST00000612497 NASPP49321 788 aaPredicted RBP10.41□□□□□ -0.74
SSX3-204ENST00000612497 PEX5P50542 639 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 OR1D5P58170 312 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 YWHAZP63104 245 aaKnown RBP10.41□□□□□ -0.74
SSX3-204ENST00000612497 CDK17Q00537 523 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 LRMPQ12912 555 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 ADAM9Q13443 819 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 EIF4EBP2Q13542 120 aaPredicted RBP10.41□□□□□ -0.74
SSX3-204ENST00000612497 HLTFQ14527 1009 aaKnown RBP eCLIP10.41□□□□□ -0.74
SSX3-204ENST00000612497 IRF4Q15306 451 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 KLHL40Q2TBA0 621 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 EDRF1Q3B7T1 1238 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 ZNF805Q5CZA5 627 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 DCAF12Q5T6F0 453 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 ANKS6Q68DC2 871 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 RETSATQ6NUM9 610 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 OGFOD3Q6PK18 319 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 NYAP1Q6ZVC0 841 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 KDELC2Q7Z4H8 507 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 FAM129CQ86XR2 697 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 PCDH20Q8N6Y1 951 aaKnown RBP10.41□□□□□ -0.74
SSX3-204ENST00000612497 TP53I13Q8NBR0 393 aaPredicted RBP10.41□□□□□ -0.74
SSX3-204ENST00000612497 PRR7Q8TB68 274 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 RBM15Q96T37 977 aaKnown RBP eCLIP10.41□□□□□ -0.74
SSX3-204ENST00000612497 SPON2Q9BUD6 331 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 SIK2Q9H0K1 926 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 DPEP2Q9H4A9 486 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 DONSONQ9NYP3 566 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 PILRAQ9UKJ1 303 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 PCDHB4Q9Y5E5 795 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 HS3ST4Q9Y661 456 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 KCNMB2Q9Y691 235 aa10.41□□□□□ -0.74
SSX3-204ENST00000612497 ZFHX3Q15911 3703 aa10.4□□□□□ -0.74
SSX3-204ENST00000612497 WIPF3A6NGB9 483 aa10.4□□□□□ -0.74
SSX3-204ENST00000612497 RHPN2P1A8MT19 583 aa10.4□□□□□ -0.74
SSX3-204ENST00000612497 ZW10O43264 779 aa10.4□□□□□ -0.74
SSX3-204ENST00000612497 PPP6R2O75170 966 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms