RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ATCAYQ86WG3 371 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 VSTM4Q8IW00 320 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 GRAMD1AQ96CP6 724 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 SGF29Q96ES7 293 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 ATXN7L3BQ96GX2 97 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 CPXM1Q96SM3 734 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 SYT11Q9BT88 431 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 MIS12Q9H081 205 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 LRRC4Q9HBW1 653 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 UCKL1Q9NWZ5 548 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 ARHGAP20Q9P2F6 1191 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 FZD4Q9ULV1 537 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 CKAP5Q14008 2032 aa12.49□□□□□ -0.41
HLA-F-230ENST00000606273 ITIH6Q6UXX5 1313 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 YJEFN3A6XGL0 299 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 E5RJQ4 531 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 E7ENQ6 273 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 MID1O15344 667 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 LATO43561 262 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 MAGEC1O60732 1142 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 ERBB2P04626 1255 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 SKILP12757 684 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 DGKAP23743 735 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 HOXD9P28356 352 aaPredicted RBP12.48□□□□□ -0.41
HLA-F-230ENST00000606273 CASP14P31944 242 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 CDH5P33151 784 aaPredicted RBP12.48□□□□□ -0.41
HLA-F-230ENST00000606273 KRT9P35527 623 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 DUSP3P51452 185 aaPredicted RBP12.48□□□□□ -0.41
HLA-F-230ENST00000606273 SLC8A3P57103 927 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 DAOAP59103 153 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 CDR2Q01850 454 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 OVGP1Q12889 678 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 CST6Q15828 149 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 IGFBP7Q16270 282 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 PTPN20Q4JDL3 420 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 MPPE1Q53F39 396 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 HS1BP3Q53T59 392 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 C2CD6Q53TS8 623 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 MBLAC2Q68D91 279 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 NAPEPLDQ6IQ20 393 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 CLEC14AQ86T13 490 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 IQCHQ86VS3 1027 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 FAM217AQ8IXS0 508 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 WFIKKN2Q8TEU8 576 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 HSFY1Q96LI6 401 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 APOLD1Q96LR9 279 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 OMDQ99983 421 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 ST7Q9NRC1 585 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 CLIC5Q9NZA1 410 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 TPX2Q9ULW0 747 aaKnown RBP12.48□□□□□ -0.41
HLA-F-230ENST00000606273 CAPN11Q9UMQ6 739 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 ENTPD2Q9Y5L3 495 aa12.48□□□□□ -0.41
HLA-F-230ENST00000606273 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 PMS2P1A4D2B8 440 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 CBFA2T2O43439 604 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 NOBOXO60393 691 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 RNASEH1O60930 286 aaKnown RBP12.47□□□□□ -0.41
HLA-F-230ENST00000606273 CYP1A1P04798 512 aaPredicted RBP12.47□□□□□ -0.41
HLA-F-230ENST00000606273 FYNP06241 537 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 ATP5BP06576 529 aaKnown RBP12.47□□□□□ -0.41
HLA-F-230ENST00000606273 RALAP11233 206 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 FERP16591 822 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 TGM2P21980 687 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 SLC8A1P32418 973 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 HARS2P49590 506 aaKnown RBP12.47□□□□□ -0.41
HLA-F-230ENST00000606273 ZNF75DP51815 510 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 YWHAGP61981 247 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLA-F-230ENST00000606273 NOMO3P69849 1222 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 EFEMP1Q12805 493 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 TAF5Q15542 800 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 HGSNATQ68CP4 663 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 HIST2H2BCQ6DN03 193 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 TMEM110Q86TL2 294 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 AHI1Q8N157 1196 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 ARL14Q8N4G2 192 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLA-F-230ENST00000606273 CPA5Q8WXQ8 436 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 SLC25A18Q9H1K4 315 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 ABCB8Q9NUT2 735 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 AIPL1Q9NZN9 384 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 RASAL2Q9UJF2 1139 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 GGA2Q9UJY4 613 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 MYO6Q9UM54 1294 aa12.47□□□□□ -0.41
HLA-F-230ENST00000606273 FLNCQ14315 2725 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TEP1Q99973 2627 aaKnown RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3DA0A087WVF3 549 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3IA0A087WXS9 549 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3EA0A087X179 549 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3KA0A087X1G2 549 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 LY6G6EA0A0G2JKS1 128 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 BLACEA4D250 179 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3FA6NER0 549 aaPredicted RBP12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TBC1D3LB9A6J9 549 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 FFAR2O15552 330 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 PPFIA2O75334 1257 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 KRT38O76015 456 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 TNFSF15O95150 251 aa12.46□□□□□ -0.41
HLA-F-230ENST00000606273 PLEKP08567 350 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms