RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SUGT1Q9Y2Z0 365 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 N6AMT1Q9Y5N5 214 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 BAZ2AQ9UIF9 1905 aaKnown RBP4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 UBE4BO95155 1302 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 EMSYQ7Z589 1322 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 UBR2Q8IWV8 1755 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 GLI3P10071 1580 aa4.14□□□□□ -1.75
HMGB1P50-201ENST00000605814 LAMB2P55268 1798 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CYP3A7-CYP3A51PA0A087WV96 503 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GOLGA8QA0A0J9YX86 632 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GOLGA8OA6NCC3 632 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SMCO2A6NFE2 343 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CLDN25C9JDP6 229 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GOLGA8NF8WBI6 632 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 H3BMQ9 156 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GOLGA8RI6L899 631 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ACOT8O14734 319 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 HAT1O14929 419 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CLDN3O15551 220 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PSTPIP1O43586 416 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 XPOTO43592 962 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SPOPO43791 374 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NPHS1O60500 1241 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 KLHL41O60662 606 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 LPXNO60711 386 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TOM1O60784 492 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TBCAO75347 108 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 JRKO75564 520 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PPM1BO75688 479 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CLPXO76031 633 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 MYO1DO94832 1006 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NR3C1P04150 777 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ERBB2P04626 1255 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ITGAVP06756 1048 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 BPGMP07738 259 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PLA2G4BP0C869 781 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 MYCLP1P12525 358 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 KRT5P13647 590 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 C6P13671 934 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF20P17024 532 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PAMP19021 973 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ITGAXP20702 1163 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ABCB4P21439 1286 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 BGNP21810 368 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 MYF6P23409 242 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CYP3A7P24462 503 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CIITAP33076 1130 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CRHR1P34998 444 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CA8P35219 290 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 LEPRP48357 1165 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 MARCKSL1P49006 195 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NDST2P52849 883 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 AP3M2P53677 418 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC12A3P55017 1021 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 RHBDL3P58872 404 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 STX1BP61266 288 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SNRPFP62306 86 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 BASP1P80723 227 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC25A3Q00325 362 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDKL1Q00532 357 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 KDSRQ06136 332 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 DLX2Q07687 328 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 DMPKQ09013 629 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GALNT1Q10472 559 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 BST1Q10588 318 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NFATC3Q12968 1075 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PDIA2Q13087 525 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ITGADQ13349 1161 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 HERC3Q15034 1050 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SF3B4Q15427 424 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CYP2A13Q16696 494 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 LRRC36Q1X8D7 754 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 LETM2Q2VYF4 491 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 AASDHQ4L235 1098 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TEX44Q53QW1 395 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 FSCBQ5H9T9 825 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NHSL2Q5HYW2 709 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 LRRC38Q5VT99 294 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 HEATR6Q6AI08 1181 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TWF2Q6IBS0 349 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 MOXD1Q6UVY6 613 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 C16orf89Q6UX73 402 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 KIF6Q6ZMV9 814 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ETV3LQ6ZN32 361 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCDC81Q6ZN84 652 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 IDO2Q6ZQW0 420 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 RFX8Q6ZV50 586 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 USP43Q70EL4 1123 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GET4Q7L5D6 327 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 KCNK18Q7Z418 384 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TFAP2DQ7Z6R9 452 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 AMIGO2Q86SJ2 522 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NLRP10Q86W26 655 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 DNAAF5Q86Y56 855 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CPNE8Q86YQ8 564 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CLVS1Q8IUQ0 354 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 LURAP1LQ8IV03 231 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NUDCD3Q8IVD9 361 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 C12orf56Q8IXR9 622 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM71AQ8IYT1 594 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms