RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 BBS2Q9BXC9 721 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PRO3102Q9H379 93 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TRABDQ9H4I3 376 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SMYD2Q9NRG4 433 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SLC27A6Q9Y2P4 619 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 FAM47DPA6NHR8 397 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SLC7A4O43246 635 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TIMM44O43615 452 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ATP9BO43861 1147 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SNAP91O60641 907 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ZWINTO95229 277 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 IGSF6O95976 241 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ASLP04424 464 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PABPC1P11940 636 aaKnown RBP12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TYRP14679 529 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GLDCP23378 1020 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HLA-FP30511 346 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CCNFP41002 786 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 RHOAP61586 193 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CRADDP78560 199 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SLC18A2Q05940 514 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HYAL1Q12794 435 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 COL19A1Q14993 1142 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 EML3Q32P44 896 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TSTD2Q5T7W7 516 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PACS1Q6VY07 963 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TPGS1Q6ZTW0 290 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 LCA5Q86VQ0 697 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KCNMB4Q86W47 210 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 RASSF3Q86WH2 238 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TMEM25Q86YD3 366 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SRRM1Q8IYB3 904 aaKnown RBP12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PCDH20Q8N6Y1 951 aaKnown RBP12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KDM1BQ8NB78 822 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 FGF13Q92913 245 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ATP2A3Q93084 1043 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 FCRL3Q96P31 734 aaPredicted RBP12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 APOL2Q9BQE5 337 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MCMBPQ9BTE3 642 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SMG9Q9H0W8 520 aaKnown RBP12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CERS4Q9HA82 394 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NOD2Q9HC29 1040 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CHRAC1Q9NRG0 131 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 THG1LQ9NWX6 298 aaKnown RBP12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TXNDC16Q9P2K2 825 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TBK1Q9UHD2 729 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SLC25A13Q9UJS0 675 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CDH7Q9ULB5 785 aa12.4□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TMEM120BA0PK00 339 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CXorf49A8MYA2 514 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 NEDD8-MDP1E9PL57 170 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TYROBPO43914 113 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 FZD6O60353 706 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CRTAMO95727 393 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 MT-ND3P03897 115 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CD70P32970 193 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SPRP35270 261 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 GRIA4P48058 902 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ARCN1P48444 511 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SCNN1BP51168 640 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 LIMK2P53671 638 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SNRPD1P62314 119 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ADAM15Q13444 863 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 OLIG2Q13516 323 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 IHHQ14623 411 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 POU6F1Q14863 301 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PCSK7Q16549 785 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 LY6G5CQ5SRR4 150 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RARS2Q5T160 578 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TEDDM1Q5T9Z0 273 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SYCE2Q6PIF2 218 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SRLQ86TD4 932 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 APCDD1Q8J025 514 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 STYXQ8WUJ0 223 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 MFSD3Q96ES6 412 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CABS1Q96KC9 395 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RBBP8Q99708 897 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CPEB1Q9BZB8 566 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 INTS9Q9NV88 658 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 DUS2Q9NX74 493 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 NKIRAS1Q9NYS0 192 aa12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 INTS6Q9UL03 887 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PDE4DIPQ5VU43 2346 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 WASH3PC4AMC7 463 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 HTRA2O43464 458 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CYP17A1P05093 508 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SRPRAP08240 638 aaKnown RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ADH5P11766 374 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TPH1P17752 444 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 NMBRP28336 390 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 EIF2DP41214 584 aaKnown RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 MTHFRP42898 656 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 MAGEA12P43365 314 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RGRP47804 291 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ATP1A2P50993 1020 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 GYS2P54840 703 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 FCHO2Q0JRZ9 810 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 EIF4HQ15056 248 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms