RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-233ENST00000602421 SNRPD1P62314 119 aaKnown RBP18.12■□□□□ 0.49
MACF1-233ENST00000602421 POU6F1Q14863 301 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 SKIV2LQ15477 1246 aaKnown RBP18.12■□□□□ 0.49
MACF1-233ENST00000602421 GAB4Q2WGN9 574 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 SIRPB2Q5JXA9 342 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 ARMC3Q5W041 872 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 TMEM215Q68D42 235 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 C22orf39Q6P5X5 142 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 PCDH20Q8N6Y1 951 aaKnown RBP18.12■□□□□ 0.49
MACF1-233ENST00000602421 KIFC1Q9BW19 673 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 TDRD1Q9BXT4 1180 aaKnown RBP18.12■□□□□ 0.49
MACF1-233ENST00000602421 TNKS2Q9H2K2 1166 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 PLAC1Q9HBJ0 212 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 CHKBQ9Y259 395 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 PCDHGC4Q9Y5F7 938 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 RPS6KL1Q9Y6S9 549 aa18.12■□□□□ 0.49
MACF1-233ENST00000602421 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 RGS16O15492 202 aaPredicted RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 USP1O94782 785 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 ATXN1LP0C7T5 689 aaKnown RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 KCNA5P22460 613 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 SP100P23497 879 aaPredicted RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 ADRA1DP25100 572 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 OAS2P29728 719 aaKnown RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 SEPT6Q14141 434 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 CRYMQ14894 314 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 DLG2Q15700 870 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 CCDC85BQ15834 202 aaPredicted RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 ANKRD20A4Q4UJ75 823 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 DGKKQ5KSL6 1271 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 AGBL2Q5U5Z8 902 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 PRPF38BQ5VTL8 546 aaKnown RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 PKN3Q6P5Z2 889 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 CES3Q6UWW8 571 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 TMEM135Q86UB9 458 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 RYBPQ8N488 228 aaPredicted RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 OR2AP1Q8NGE2 309 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 TTC8Q8TAM2 541 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 PTCD2Q8WV60 388 aaKnown RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 ZNF669Q96BR6 464 aaPredicted RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 NSMCE3Q96MG7 304 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 TRIB3Q96RU7 358 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 RPP25Q9BUL9 199 aaKnown RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 CHRAC1Q9NRG0 131 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 FETUBQ9UGM5 382 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 EVLQ9UI08 416 aaPredicted RBP18.11■□□□□ 0.49
MACF1-233ENST00000602421 SLC24A2Q9UI40 661 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 SLCO3A1Q9UIG8 710 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 SLC8A2Q9UPR5 921 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 NUMBLQ9Y6R0 609 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 CDH23Q9H251 3354 aa18.11■□□□□ 0.49
MACF1-233ENST00000602421 DOCK8Q8NF50 2099 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 GRXCR2A6NFK2 248 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 RNF40O75150 1001 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 CDH16O75309 829 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 GSRP00390 522 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 SRPRAP08240 638 aaKnown RBP18.1■□□□□ 0.49
MACF1-233ENST00000602421 DLDP09622 509 aaKnown RBP18.1■□□□□ 0.49
MACF1-233ENST00000602421 ALADP13716 330 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 PRKCHP24723 683 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 KDSRQ06136 332 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 SMAD4Q13485 552 aaKnown RBP18.1■□□□□ 0.49
MACF1-233ENST00000602421 HTR4Q13639 388 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 GALNT3Q14435 633 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 SKIDA1Q1XH10 827 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 ITPRIPL2Q3MIP1 535 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 TTMPQ5BVD1 217 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 CYS1Q717R9 158 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.1■□□□□ 0.49
MACF1-233ENST00000602421 CYB5D2Q8WUJ1 264 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 MYLIPQ8WY64 445 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 RMDN1Q96DB5 314 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 PGM2Q96G03 612 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 ATP6V1G3Q96LB4 118 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 ADGRE3Q9BY15 652 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 STMN4Q9H169 189 aaPredicted RBP18.1■□□□□ 0.49
MACF1-233ENST00000602421 UBE2ZQ9H832 354 aaPredicted RBP18.1■□□□□ 0.49
MACF1-233ENST00000602421 MRM3Q9HC36 420 aaKnown RBP18.1■□□□□ 0.49
MACF1-233ENST00000602421 GTSE1Q9NYZ3 720 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 TCAF1Q9Y4C2 921 aa18.1■□□□□ 0.49
MACF1-233ENST00000602421 HEATR9A2RTY3 570 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.09■□□□□ 0.49
MACF1-233ENST00000602421 HMGB1P1B2RPK0 211 aaPredicted RBP18.09■□□□□ 0.49
MACF1-233ENST00000602421 ANHXE9PGG2 379 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 TIMM44O43615 452 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 ZNF821O75541 412 aaPredicted RBP18.09■□□□□ 0.49
MACF1-233ENST00000602421 GJA4P35212 333 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 MSH2P43246 934 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 RECQLP46063 649 aaPredicted RBP18.09■□□□□ 0.49
MACF1-233ENST00000602421 VASPP50552 380 aaPredicted RBP18.09■□□□□ 0.49
MACF1-233ENST00000602421 ST8SIA6P61647 398 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 BCL2L1Q07817 233 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 TRAF2Q12933 501 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 LAMB3Q13751 1172 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 EFTUD2Q15029 972 aaKnown RBP eCLIP18.09■□□□□ 0.49
MACF1-233ENST00000602421 KBTBD12Q3ZCT8 623 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 CARD16Q5EG05 197 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 TDRPQ86YL5 185 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 CTAGE3PQ8IX95 158 aa18.09■□□□□ 0.49
MACF1-233ENST00000602421 RIBC1Q8N443 379 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms