RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 VILLO15195 856 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 KRT1P04264 644 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 SYPP08247 313 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 CD59P13987 128 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 PRLRP16471 622 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 NOP2P46087 812 aaKnown RBP15.93■□□□□ 0.14
RPS28-203ENST00000600659 VAV2P52735 878 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 NSUN2Q08J23 767 aaKnown RBP eCLIP15.93■□□□□ 0.14
RPS28-203ENST00000600659 IHHQ14623 411 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 FBXL19Q6PCT2 694 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 MFSD7Q6UXD7 560 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 PIP4P1Q86T03 277 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 CAMK1DQ8IU85 385 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 MAP7D3Q8IWC1 876 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 RHOT1Q8IXI2 618 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 KRT35Q92764 455 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 KLK6Q92876 244 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 FATE1Q969F0 183 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 SERAC1Q96JX3 654 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 TSGA13Q96PP4 275 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 TUBGCP5Q96RT8 1024 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 SUV39H2Q9H5I1 410 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 FZD3Q9NPG1 666 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 SEPT3Q9UH03 358 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 DMTF1Q9Y222 760 aa15.93■□□□□ 0.14
RPS28-203ENST00000600659 PSTPIP1O43586 416 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 SPOPO43791 374 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 CD38P28907 300 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 NUDT1P36639 197 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 CDKN2BP42772 138 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 RAD51Q06609 339 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 ADCY2Q08462 1091 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 CCDC15Q0P6D6 951 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 HLA-BQ31612 363 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 SETMARQ53H47 684 aaPredicted RBP15.92■□□□□ 0.14
RPS28-203ENST00000600659 KIAA1161Q6NSJ0 714 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 DGLUCYQ7Z3D6 616 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 PRPF39Q86UA1 669 aaKnown RBP15.92■□□□□ 0.14
RPS28-203ENST00000600659 LRRC49Q8IUZ0 686 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 LRRC57Q8N9N7 239 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 RAB7BQ96AH8 199 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 RNF25Q96BH1 459 aaPredicted RBP15.92■□□□□ 0.14
RPS28-203ENST00000600659 HDAC11Q96DB2 347 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 OLFM3Q96PB7 478 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 KLF6Q99612 283 aaPredicted RBP15.92■□□□□ 0.14
RPS28-203ENST00000600659 DESI2Q9BSY9 194 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 GAREM1Q9H706 876 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 TRIM10Q9UDY6 481 aa15.92■□□□□ 0.14
RPS28-203ENST00000600659 TDRD6O60522 2096 aaKnown RBP15.91■□□□□ 0.14
RPS28-203ENST00000600659 UPK3BL1B0FP48 263 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 UPK3BL2E5RIL1 263 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 H0Y8X5 98 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 KCNK3O14649 394 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 RAD51BO15315 384 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 SLC31A1O15431 190 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 PCDH8O95206 1070 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 TNNT1P13805 278 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 MAXP61244 160 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 AP1S1P61966 158 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 HNRNPDQ14103 355 aaKnown RBP15.91■□□□□ 0.14
RPS28-203ENST00000600659 GRM3Q14832 879 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 SHBQ15464 509 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 ZNF423Q2M1K9 1284 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 UAP1L1Q3KQV9 507 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 ALG1LQ6GMV1 187 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 NPNTQ6UXI9 565 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 GCNT7Q6ZNI0 430 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 SPATS2Q86XZ4 545 aaKnown RBP15.91■□□□□ 0.14
RPS28-203ENST00000600659 HCAR2Q8TDS4 363 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 SPOCK2Q92563 424 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 ZNF641Q96N77 438 aaPredicted RBP15.91■□□□□ 0.14
RPS28-203ENST00000600659 NUDCD1Q96RS6 583 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 C1QTNF2Q9BXJ5 285 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 GPR27Q9NS67 375 aa15.91■□□□□ 0.14
RPS28-203ENST00000600659 DDX56Q9NY93 547 aaKnown RBP15.91■□□□□ 0.14
RPS28-203ENST00000600659 LRP4O75096 1905 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 GRID2IPA4D2P6 1211 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 PRAMEF26H0Y7S4 382 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 GIPC1O14908 333 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 HTRA2O43464 458 aaPredicted RBP15.9■□□□□ 0.14
RPS28-203ENST00000600659 TSPAN6O43657 245 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 OPHN1O60890 802 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 ZNF883P0CG24 379 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 HNRNPA2B1P22626 353 aaKnown RBP15.9■□□□□ 0.14
RPS28-203ENST00000600659 CCNCP24863 283 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 HSPA9P38646 679 aaKnown RBP15.9■□□□□ 0.14
RPS28-203ENST00000600659 MMP13P45452 471 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 SCNN1BP51168 640 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 ATXN3P54252 364 aaPredicted RBP15.9■□□□□ 0.14
RPS28-203ENST00000600659 NXPH1P58417 271 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 ZNF235Q14590 738 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 TEAD4Q15561 434 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 IFI16Q16666 785 aaKnown RBP15.9■□□□□ 0.14
RPS28-203ENST00000600659 UGP2Q16851 508 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 FAM182AQ5T1J6 154 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 KDM7AQ6ZMT4 941 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 SPOCD1Q6ZMY3 1216 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 DBX2Q6ZNG2 339 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 ERMP1Q7Z2K6 904 aa15.9■□□□□ 0.14
RPS28-203ENST00000600659 TTC7BQ86TV6 843 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms