RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 NEU2Q9Y3R4 380 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 RAI2Q9Y5P3 530 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 A0A1W2PP55 124 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 HTRA2O43464 458 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 DNTTP04053 509 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 C5AR1P21730 350 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 CES1P23141 567 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 HOXA6P31267 233 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 CSTF1Q05048 431 aaKnown RBP20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 BCL2L1Q07817 233 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 TUBB2AQ13885 445 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 TRIP13Q15645 432 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 ZNF805Q5CZA5 627 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 FAM46CQ5VWP2 391 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 KDELC1Q6UW63 502 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 ARHGEF18Q6ZSZ5 1173 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 PARS2Q7L3T8 475 aaKnown RBP20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 CCDC89Q8N998 374 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 ECHDC3Q96DC8 303 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 KRT12Q99456 494 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 TUBB2BQ9BVA1 445 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 OSBPL1AQ9BXW6 950 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 ATP13A3Q9H7F0 1226 aa20.21■□□□□ 0.83
SHKBP1-222ENST00000600320 TSPAN11A1L157 253 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 AXIN1O15169 862 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 ADH1BP00325 375 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 KRT14P02533 472 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 SERPINF2P08697 491 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 ITGB7P26010 798 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 SERPINA4P29622 427 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 FNTBP49356 437 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 ZBTB16Q05516 673 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 CNTN1Q12860 1018 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 GRM3Q14832 879 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 PARP6Q2NL67 630 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 KLHDC8BQ8IXV7 354 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 HDDC3Q8N4P3 179 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 ZNF641Q96N77 438 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 TDRD1Q9BXT4 1180 aaKnown RBP20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 PCDH9Q9HC56 1237 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 USP36Q9P275 1121 aaKnown RBP20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 PCYOX1Q9UHG3 505 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 CHKBQ9Y259 395 aa20.2■□□□□ 0.82
SHKBP1-222ENST00000600320 FZD6O60353 706 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 SOCS5O75159 536 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 PMPCBO75439 489 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 ECEL1O95672 775 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 PRLP01236 227 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 PDHA1P08559 390 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 ABL2P42684 1182 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 VPS41P49754 854 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 MRPS25P82663 173 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 LMNB2Q03252 620 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 SLC14A2Q15849 920 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 PCSK7Q16549 785 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 DNTTIP2Q5QJE6 756 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 FRMD1Q8N878 549 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 RLN3Q8WXF3 142 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 SLCO2A1Q92959 643 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 NEUROG2Q9H2A3 272 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 ETNK1Q9HBU6 452 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 ITM2CQ9NQX7 267 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 FBXL12Q9NXK8 326 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 PAK5Q9P286 719 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 DKK3Q9UBP4 350 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 FAM153AQ9UHL3 310 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 FBXO4Q9UKT5 387 aa20.19■□□□□ 0.82
SHKBP1-222ENST00000600320 C16orf96A6NNT2 1141 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 GALR2O43603 387 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 PGLSO95336 258 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 PRKCGP05129 697 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 ACADMP11310 421 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 TIMP2P16035 220 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 ITIH2P19823 946 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 P2RY2P41231 377 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 TPMTP51580 245 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 WNT3AP56704 352 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 ANGPT1Q15389 498 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 MAP7D1Q3KQU3 841 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 TTC31Q49AM3 519 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 LRRC73Q5JTD7 316 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 PIP5KL1Q5T9C9 394 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 ERN2Q76MJ5 926 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 GANCQ8TET4 914 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 GRK7Q8WTQ7 553 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 PDCD6IPQ8WUM4 868 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 FAM131CQ96AQ9 280 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 MRGPRX2Q96LB1 330 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 SMIM14Q96QK8 99 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 SCML1Q9UN30 329 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 CYP8B1Q9UNU6 501 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 INVSQ9Y283 1065 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 PCDHB9Q9Y5E1 797 aa20.18■□□□□ 0.82
SHKBP1-222ENST00000600320 ZNF318Q5VUA4 2279 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 TTI1O43156 1089 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 RNASEH2AO75792 299 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 ACTN2P35609 894 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 GEMP55040 296 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms