RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 ACRP10323 421 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 CCR10P46092 362 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 ZXDBP98169 803 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 ZNF235Q14590 738 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 GPATCH11Q8N954 259 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 POLR1EQ9GZS1 481 aaKnown RBP14.6□□□□□ -0.07
VRK3-217ENST00000599538 SUDS3Q9H7L9 328 aaPredicted RBP14.6□□□□□ -0.07
VRK3-217ENST00000599538 MROH6A6NGR9 719 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 LDB2O43679 373 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 ATP5HO75947 161 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 ALDH1A3P47895 512 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 ABCE1P61221 599 aaKnown RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 TUBB3Q13509 450 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 BTG3Q14201 252 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 LRRC26Q2I0M4 334 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 SPDYAQ5MJ70 313 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 VWA5B1Q5TIE3 1220 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 KLHDC10Q6PID8 442 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 DNAJB7Q7Z6W7 309 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 SH3RF2Q8TEC5 729 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 OVCA2Q8WZ82 227 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 HDAC10Q969S8 669 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 NXNL1Q96CM4 212 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 ELMO2Q96JJ3 720 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 SMIM14Q96QK8 99 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 CDK5RAP1Q96SZ6 601 aaKnown RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 KLF16Q9BXK1 252 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 ACE2Q9BYF1 805 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 PRKD2Q9BZL6 878 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 ZNF334Q9HCZ1 680 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 SAR1AQ9NR31 198 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 MARCH4Q9P2E8 410 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 TLK1Q9UKI8 766 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 RUVBL2Q9Y230 463 aaKnown RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 ARL5AQ9Y689 179 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 TRIM43BA6NCK2 446 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 CLTBP09497 229 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 PAMP19021 973 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 CDH4P55283 916 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 RAB10P61026 200 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 USP4Q13107 963 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 TAF12Q16514 161 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 UGP2Q16851 508 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 CCDC91Q7Z6B0 441 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 FSTL5Q8N475 847 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 TRIM43Q96BQ3 446 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 ZFRQ96KR1 1074 aaKnown RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 GPR78Q96P69 363 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 RANBP9Q96S59 729 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 OLFM1Q99784 485 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 OMDQ99983 421 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 GATA5Q9BWX5 397 aaPredicted RBP14.59□□□□□ -0.07
VRK3-217ENST00000599538 MAGEH1Q9H213 219 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 NOD2Q9HC29 1040 aa14.59□□□□□ -0.07
VRK3-217ENST00000599538 LTBP2Q14767 1821 aa14.58□□□□□ -0.07
VRK3-217ENST00000599538 ZNF195O14628 629 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 PRRG1O14668 218 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 CPA2P48052 419 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 CD151P48509 253 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 ALDH18A1P54886 795 aaKnown RBP14.58□□□□□ -0.08
VRK3-217ENST00000599538 CDK18Q07002 472 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 SLC12A1Q13621 1099 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 SNCBQ16143 134 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 ACBD5Q5T8D3 534 aaPredicted RBP14.58□□□□□ -0.08
VRK3-217ENST00000599538 C1orf53Q5VUE5 145 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 TPGS2Q68CL5 300 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 FAM43BQ6ZT52 329 aaPredicted RBP14.58□□□□□ -0.08
VRK3-217ENST00000599538 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.58□□□□□ -0.08
VRK3-217ENST00000599538 ZNF781Q8N8C0 355 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 OR6P1Q8NGX9 317 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 AGR3Q8TD06 166 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 BLOC1S5Q8TDH9 187 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 INPP5DQ92835 1189 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 TBATAQ96M53 351 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 CEP295NLQ96MC4 621 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 RILPQ96NA2 401 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 WWP1Q9H0M0 922 aa14.58□□□□□ -0.08
VRK3-217ENST00000599538 CAPN14A8MX76 684 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 TARM1B6A8C7 271 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 NRG2O14511 850 aaPredicted RBP14.57□□□□□ -0.08
VRK3-217ENST00000599538 TRAFD1O14545 582 aaPredicted RBP14.57□□□□□ -0.08
VRK3-217ENST00000599538 CHRNGP07510 517 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 STMN1P16949 149 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 GRK2P25098 689 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 PTPN4P29074 926 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 HADHAP40939 763 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 WDR5P61964 334 aaKnown RBP14.57□□□□□ -0.08
VRK3-217ENST00000599538 RAB33AQ14088 237 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 FSCBQ5H9T9 825 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 RABGAP1LQ5R372 815 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 ADGRF1Q5T601 910 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 CXorf57Q6NSI4 855 aaKnown RBP14.57□□□□□ -0.08
VRK3-217ENST00000599538 RINLQ6ZS11 566 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 LONP2Q86WA8 852 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 WDR75Q8IWA0 830 aaKnown RBP14.57□□□□□ -0.08
VRK3-217ENST00000599538 TTC16Q8NEE8 873 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 OR13C4Q8NGS5 318 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 FBXO27Q8NI29 283 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 ADAMTS19Q8TE59 1207 aa14.57□□□□□ -0.08
VRK3-217ENST00000599538 PLD4Q96BZ4 506 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms