RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 MYLK3Q32MK0 819 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 ARL13BQ3SXY8 428 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 C3orf38Q5JPI3 329 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 GPR155Q7Z3F1 870 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 SLC35F3Q8IY50 421 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 PHACTR4Q8IZ21 702 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 ZNF248Q8NDW4 579 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 ASB12Q8WXK4 309 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 NTAN1Q96AB6 310 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 HMCESQ96FZ2 354 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 ATXN7L3BQ96GX2 97 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 EXOC2Q96KP1 924 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 ZNF578Q96N58 590 aaPredicted RBP14.87□□□□□ -0.03
IRF3-223ENST00000599223 WRAP53Q9BUR4 548 aaKnown RBP14.87□□□□□ -0.03
IRF3-223ENST00000599223 BOCQ9BWV1 1114 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 POLR1BQ9H9Y6 1135 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 CPNE5Q9HCH3 593 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 APOBEC3BQ9UH17 382 aaKnown RBP14.87□□□□□ -0.03
IRF3-223ENST00000599223 SATB2Q9UPW6 733 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 CSNK1G3Q9Y6M4 447 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 COL6A6A6NMZ7 2263 aa14.87□□□□□ -0.03
IRF3-223ENST00000599223 SCN8AQ9UQD0 1980 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 TCRBV5S1A1TA0A578 114 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 CCP110O43303 1012 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 KDELR3O43731 214 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 MMP20O60882 483 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 DEKP35659 375 aaKnown RBP14.86□□□□□ -0.03
IRF3-223ENST00000599223 GEMIN4P57678 1058 aaKnown RBP14.86□□□□□ -0.03
IRF3-223ENST00000599223 IRF4Q15306 451 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 TCEA2Q15560 299 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 PRRT3Q5FWE3 981 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 KCTD16Q68DU8 428 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 GDPD4Q6W3E5 623 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 MON1BQ7L1V2 547 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 ZSCAN30Q86W11 494 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 RTL3Q8N8U3 475 aaKnown RBP14.86□□□□□ -0.03
IRF3-223ENST00000599223 TP53I13Q8NBR0 393 aaPredicted RBP14.86□□□□□ -0.03
IRF3-223ENST00000599223 PRR11Q96HE9 360 aaPredicted RBP14.86□□□□□ -0.03
IRF3-223ENST00000599223 GDAP1L1Q96MZ0 367 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 EPAS1Q99814 870 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.86□□□□□ -0.03
IRF3-223ENST00000599223 OSBPL1AQ9BXW6 950 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 CLPBQ9H078 707 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 ABCG4Q9H172 646 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 LHX3Q9UBR4 397 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 IPO11Q9UI26 975 aaKnown RBP14.86□□□□□ -0.03
IRF3-223ENST00000599223 ENTPD2Q9Y5L3 495 aa14.86□□□□□ -0.03
IRF3-223ENST00000599223 TEX51A0A1B0GUA7 166 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 EME2A4GXA9 379 aaPredicted RBP14.85□□□□□ -0.03
IRF3-223ENST00000599223 TK2O00142 265 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 MUSKO15146 869 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 BUB1O43683 1085 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 PIGNO95427 931 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 POP4O95707 220 aaKnown RBP14.85□□□□□ -0.03
IRF3-223ENST00000599223 KRT3P12035 628 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 GPD1P21695 349 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 DUSP3P51452 185 aaPredicted RBP14.85□□□□□ -0.03
IRF3-223ENST00000599223 THOP1P52888 689 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 NR0B2Q15466 257 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 CLEC16AQ2KHT3 1053 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 WDR59Q6PJI9 974 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 TRIM72Q6ZMU5 477 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 MACC1Q6ZN28 852 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 PHF13Q86YI8 300 aaPredicted RBP14.85□□□□□ -0.03
IRF3-223ENST00000599223 ZNF843Q8N446 348 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 C3orf20Q8ND61 904 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 ENOX1Q8TC92 643 aaKnown RBP14.85□□□□□ -0.03
IRF3-223ENST00000599223 VCPIP1Q96JH7 1222 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 TTYH3Q9C0H2 523 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 GRPEL1Q9HAV7 217 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 ADAM22Q9P0K1 906 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 SALL4Q9UJQ4 1053 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 HPCAL4Q9UM19 191 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 COQ6Q9Y2Z9 468 aa14.85□□□□□ -0.03
IRF3-223ENST00000599223 FLNBO75369 2602 aaKnown RBP14.85□□□□□ -0.03
IRF3-223ENST00000599223 LMO7DNF2Z398 122 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 TPP1O14773 563 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 TIMP2P16035 220 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 TSHRP16473 764 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 EPHB2P29323 1055 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 NSFP46459 744 aaKnown RBP14.84□□□□□ -0.03
IRF3-223ENST00000599223 ADKP55263 362 aaKnown RBP14.84□□□□□ -0.03
IRF3-223ENST00000599223 ERVPABLB-1P60509 514 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 RHOAP61586 193 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 RPL7AP62424 266 aaKnown RBP14.84□□□□□ -0.03
IRF3-223ENST00000599223 OGDHQ02218 1023 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 C19orf57Q0VDD7 668 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 SYCP1Q15431 976 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 C6orf132Q5T0Z8 1188 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 RBM43Q6ZSC3 357 aaKnown RBP14.84□□□□□ -0.03
IRF3-223ENST00000599223 SLFN11Q7Z7L1 901 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 TTC7BQ86TV6 843 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 ZSWIM9Q86XI8 627 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 ZNF354CQ86Y25 554 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 KYQ8NBH2 561 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 KCNE4Q8WWG9 221 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 ARHGEF26Q96DR7 871 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 MCEEQ96PE7 176 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 IL12RB2Q99665 862 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 SELENOOQ9BVL4 669 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms