RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 GALNT15Q8N3T1 639 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 LZTR1Q8N653 840 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 CENPTQ96BT3 561 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 IFT43Q96FT9 208 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 XPO4Q9C0E2 1151 aaKnown RBP15.25■□□□□ 0.03
LIG1-215ENST00000597901 CAAP1Q9H8G2 361 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 UCKL1Q9NWZ5 548 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 IP6K2Q9UHH9 426 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 IPO11Q9UI26 975 aaKnown RBP15.25■□□□□ 0.03
LIG1-215ENST00000597901 DFFAO00273 331 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 SIGLEC6O43699 453 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 TM7SF2O76062 418 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 RARAP10276 462 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 CDK4P11802 303 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 CKMT2P17540 419 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 AMPD1P23109 780 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 RABIFP47224 123 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 SUOXP51687 545 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 IL10RBQ08334 325 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 NSUN2Q08J23 767 aaKnown RBP eCLIP15.24■□□□□ 0.03
LIG1-215ENST00000597901 ZNF211Q13398 564 aaPredicted RBP15.24■□□□□ 0.03
LIG1-215ENST00000597901 DPYSQ14117 519 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 FZD2Q14332 565 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 GRM3Q14832 879 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 DPYSL2Q16555 572 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 TMEM52BQ4KMG9 183 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 KYAT3Q6YP21 454 aaKnown RBP15.24■□□□□ 0.03
LIG1-215ENST00000597901 ARHGAP36Q6ZRI8 547 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 POLNQ7Z5Q5 900 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 CAMK1DQ8IU85 385 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 TP53INP2Q8IXH6 220 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 NPWQ8N729 165 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 TSEN2Q8NCE0 465 aaKnown RBP15.24■□□□□ 0.03
LIG1-215ENST00000597901 HSPH1Q92598 858 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 BTBD6Q96KE9 485 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 ZNF641Q96N77 438 aaPredicted RBP15.24■□□□□ 0.03
LIG1-215ENST00000597901 ZWILCHQ9H900 591 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 GPR27Q9NS67 375 aa15.24■□□□□ 0.03
LIG1-215ENST00000597901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.24■□□□□ 0.03
LIG1-215ENST00000597901 MAP1BP46821 2468 aaKnown RBP15.24■□□□□ 0.03
LIG1-215ENST00000597901 SPTY2D1-AS1A0A0U1RR47 76 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 FAM149AA5PLN7 773 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 H3BRJ5 948 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 TAF4O00268 1085 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 PIAS2O75928 621 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 PIGNO95427 931 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 GIMD1P0DJR0 217 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 XPAP23025 273 aaPredicted RBP15.23■□□□□ 0.03
LIG1-215ENST00000597901 HNRNPH3P31942 346 aaKnown RBP15.23■□□□□ 0.03
LIG1-215ENST00000597901 ARL4AP40617 200 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 RGRP47804 291 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 ACADVLP49748 655 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 PFN3P60673 137 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 UGP2Q16851 508 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 PROX2Q3B8N5 592 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 TXNRD3NBQ6F5E7 133 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 PTAR1Q7Z6K3 402 aaPredicted RBP15.23■□□□□ 0.03
LIG1-215ENST00000597901 TMPRSS12Q86WS5 348 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 NIPA2Q8N8Q9 360 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 CXorf40AQ8TE69 158 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 NUP85Q9BW27 656 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 SP110Q9HB58 689 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 DNAJC28Q9NX36 388 aa15.23■□□□□ 0.03
LIG1-215ENST00000597901 KMT2BQ9UMN6 2715 aaPredicted RBP15.23■□□□□ 0.03
LIG1-215ENST00000597901 CEP295Q9C0D2 2601 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 TSPAN11A1L157 253 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 TRABD2BA6NFA1 517 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 SRRM3A6NNA2 597 aaPredicted RBP15.22■□□□□ 0.03
LIG1-215ENST00000597901 MYO1FO00160 1098 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 RIOK3O14730 519 aaKnown RBP15.22■□□□□ 0.03
LIG1-215ENST00000597901 RFPL3O75679 317 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 CSF2P04141 144 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 TPM3P06753 285 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 EIF4A3P38919 411 aaKnown RBP15.22■□□□□ 0.03
LIG1-215ENST00000597901 HNRNPKP61978 463 aaKnown RBP eCLIP15.22■□□□□ 0.03
LIG1-215ENST00000597901 CAMK2BQ13554 666 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 PDE1CQ14123 709 aaPredicted RBP15.22■□□□□ 0.03
LIG1-215ENST00000597901 RFTN1Q14699 578 aaPredicted RBP15.22■□□□□ 0.03
LIG1-215ENST00000597901 SMTNL2Q2TAL5 461 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 TPRG1LQ5T0D9 272 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 KDM7AQ6ZMT4 941 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 DENND6BQ8NEG7 585 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 OR4C6Q8NH72 309 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 TEKT4Q8WW24 435 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 CSPG4P5Q96PW8 444 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 TUBGCP5Q96RT8 1024 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 WRAP53Q9BUR4 548 aaKnown RBP15.22■□□□□ 0.03
LIG1-215ENST00000597901 MBNL1Q9NR56 388 aaKnown RBP15.22■□□□□ 0.03
LIG1-215ENST00000597901 ETNK2Q9NVF9 386 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 KLF15Q9UIH9 416 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 ANAPC7Q9UJX3 599 aa15.22■□□□□ 0.03
LIG1-215ENST00000597901 TMEM131Q92545 1883 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 NYNRINQ9P2P1 1898 aaKnown RBP15.21■□□□□ 0.03
LIG1-215ENST00000597901 NEMP2A6NFY4 417 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 SCAMP1O15126 338 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 FFAR2O15552 330 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 JUPP14923 745 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 IL4RP24394 825 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 ACP1P24666 158 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 SLC10A7Q0GE19 358 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms