RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 LRTOMTQ8WZ04 291 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 ZUFSPQ96AP4 578 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 SLCO4A1Q96BD0 722 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 ROPN1LQ96C74 230 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 MOCOSQ96EN8 888 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 RMND5BQ96G75 393 aaPredicted RBP13.37□□□□□ -0.27
VRK3-209ENST00000594948 MARK4Q96L34 752 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 APOL2Q9BQE5 337 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 RHOBTB2Q9BYZ6 727 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 POMKQ9H5K3 350 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 ANLNQ9NQW6 1124 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 C8orf4Q9NR00 106 aa13.37□□□□□ -0.27
VRK3-209ENST00000594948 DYTNA2CJ06 578 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 BBIP1A8MTZ0 92 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 I6L893 689 aaPredicted RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 FBP2O00757 339 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 GABRDO14764 452 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 UBDO15205 165 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 GPR32O75388 356 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 TRPA1O75762 1119 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 BEST1O76090 585 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 SRP72O76094 671 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 JCHAINP01591 159 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 PCSK6P29122 969 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 LRPAP1P30533 357 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 CYP2C18P33260 490 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 AVPR1AP37288 418 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 CXCR3P49682 368 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 NDUFV1P49821 464 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 PM20D1Q6GTS8 502 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 DCLRE1AQ6PJP8 1040 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 CEP97Q8IW35 865 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 LRRC43Q8N309 656 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 MFSD2AQ8NA29 543 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 ADAMTS16Q8TE57 1224 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 TRMOQ9BU70 441 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 PRKD2Q9BZL6 878 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 ULBP1Q9BZM6 244 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 NXF3Q9H4D5 531 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 VPS45Q9NRW7 570 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 DDX18Q9NVP1 670 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 CROTQ9UKG9 612 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 KCNH4Q9UQ05 1017 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 TCAF1Q9Y4C2 921 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 NRP1O14786 923 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 HTRA2O43464 458 aaPredicted RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 SAT1P21673 171 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 YY1P25490 414 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 GEMP55040 296 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 ADARP55265 1226 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 TAS2R39P59534 338 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 MPP1Q00013 466 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 ILF2Q12905 390 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 LPIN1Q14693 890 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 SPATS1Q496A3 300 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 KRT80Q6KB66 452 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 PRMT9Q6P2P2 845 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 ERO1BQ86YB8 467 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 SLC22A9Q8IVM8 553 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 MFSD6LQ8IWD5 586 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 PCDH20Q8N6Y1 951 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 GABPB2Q8TAK5 448 aaPredicted RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 IL12RB2Q99665 862 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 TMEM79Q9BSE2 394 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 OSBPL2Q9H1P3 480 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 CLK4Q9HAZ1 481 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 ENTPD7Q9NQZ7 604 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 IGSF5Q9NSI5 407 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 OLAHQ9NV23 265 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 ZNHIT2Q9UHR6 403 aa13.36□□□□□ -0.27
VRK3-209ENST00000594948 CNOT6Q9ULM6 557 aaKnown RBP13.36□□□□□ -0.27
VRK3-209ENST00000594948 PATJQ8NI35 1801 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 MYOCOSA0A1B0GUC4 107 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 PRORSD1PA6NEY8 169 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 TRIM64A6NGJ6 449 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 TMEM233B4DJY2 109 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 GOLGA8TH3BQL2 631 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 CLDN5O00501 218 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 MRASO14807 208 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 NRP2O60462 931 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 MYL3P08590 195 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 RBP1P09455 135 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 C7P10643 843 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 DARSP14868 501 aaKnown RBP13.35□□□□□ -0.27
VRK3-209ENST00000594948 TCN1P20061 433 aaPredicted RBP13.35□□□□□ -0.27
VRK3-209ENST00000594948 HTR7P34969 479 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 CLCN5P51795 746 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 SLC12A2P55011 1212 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 NUP107P57740 925 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 LILRA4P59901 499 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 CYTH1Q15438 398 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 SLC14A2Q15849 920 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms