RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 KLHL40Q2TBA0 621 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 FAM72AQ5TYM5 149 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 FAM72DQ6L9T8 149 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 RETSATQ6NUM9 610 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 RWDD4Q6NW29 188 aaKnown RBP12.42□□□□□ -0.42
SIN3B-204ENST00000594372 USP53Q70EK8 1073 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 RAB11FIP2Q7L804 512 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 FAM72BQ86X60 149 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 XYLT1Q86Y38 959 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 ZNF397Q8NF99 534 aaPredicted RBP12.42□□□□□ -0.42
SIN3B-204ENST00000594372 EXOC2Q96KP1 924 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 LENG8Q96PV6 779 aaPredicted RBP12.42□□□□□ -0.42
SIN3B-204ENST00000594372 EPAS1Q99814 870 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 SLC13A1Q9BZW2 595 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 CEP44Q9C0F1 390 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 KLC2Q9H0B6 622 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 FOXJ2Q9P0K8 574 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 IL17BQ9UHF5 180 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 DNAJC12Q9UKB3 198 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 STAP1Q9ULZ2 295 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 DOLKQ9UPQ8 538 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
SIN3B-204ENST00000594372 SPTBN1Q01082 2364 aaKnown RBP12.41□□□□□ -0.42
SIN3B-204ENST00000594372 PRAMEF33A0A0G2JMD5 474 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 D6RAR5 112 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 NTN3O00634 580 aaPredicted RBP12.41□□□□□ -0.42
SIN3B-204ENST00000594372 TPP1O14773 563 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 TSPAN6O43657 245 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 PRAMEF10O60809 474 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 TCEA3O75764 348 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 PIGNO95427 931 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 PPARDQ03181 441 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 PTK2Q05397 1052 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 C15orf59Q2T9L4 293 aaPredicted RBP12.41□□□□□ -0.42
SIN3B-204ENST00000594372 HSP90AA4PQ58FG1 418 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 ZNF805Q5CZA5 627 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 GBP6Q6ZN66 633 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 ENOSF1Q7L5Y1 443 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 TMPRSS9Q7Z410 1059 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
SIN3B-204ENST00000594372 HTR3CQ8WXA8 447 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 NT5C3BQ969T7 300 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 CCDC97Q96F63 343 aaPredicted RBP12.41□□□□□ -0.42
SIN3B-204ENST00000594372 GFM1Q96RP9 751 aaKnown RBP12.41□□□□□ -0.42
SIN3B-204ENST00000594372 ZYG11BQ9C0D3 744 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 METTL5Q9NRN9 209 aaKnown RBP12.41□□□□□ -0.42
SIN3B-204ENST00000594372 GPR34Q9UPC5 381 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 OR1A2Q9Y585 309 aa12.41□□□□□ -0.42
SIN3B-204ENST00000594372 SPENQ96T58 3664 aaKnown RBP12.4□□□□□ -0.42
SIN3B-204ENST00000594372 TERTO14746 1132 aaKnown RBP12.4□□□□□ -0.42
SIN3B-204ENST00000594372 AREL1O15033 823 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 GNA14O95837 355 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 PCCBP05166 539 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 TIMP2P16035 220 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 ITGB6P18564 788 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 RPIAP49247 311 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 CSRP3P50461 194 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 MAPK10P53779 464 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 INHBCP55103 352 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 CLCA4Q14CN2 919 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 EXOC3L4Q17RC7 722 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 MYLK3Q32MK0 819 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 SLC25A52Q3SY17 297 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 COLEC12Q5KU26 742 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 ESRP1Q6NXG1 681 aaKnown RBP12.4□□□□□ -0.42
SIN3B-204ENST00000594372 ENPP7Q6UWV6 458 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 MACC1Q6ZN28 852 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 TTC7BQ86TV6 843 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 ZNF354CQ86Y25 554 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 ARL10Q8N8L6 244 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 FAM174AQ8TBP5 190 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 CXorf40AQ8TE69 158 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 BTN2A2Q8WVV5 523 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 CPA5Q8WXQ8 436 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 ARHGEF2Q92974 986 aaKnown RBP12.4□□□□□ -0.42
SIN3B-204ENST00000594372 GLMNQ92990 594 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 NAT6Q93015 286 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 PMEPA1Q969W9 287 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 PDXPQ96GD0 296 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 LIN37Q96GY3 246 aaPredicted RBP12.4□□□□□ -0.42
SIN3B-204ENST00000594372 TIGD1Q96MW7 591 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 ARHGAP9Q9BRR9 750 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 PDCL3Q9H2J4 239 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 SUDS3Q9H7L9 328 aaPredicted RBP12.4□□□□□ -0.42
SIN3B-204ENST00000594372 NCKIPSDQ9NZQ3 722 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 NEU3Q9UQ49 428 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 LOXL2Q9Y4K0 774 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 ICE1Q9Y2F5 2266 aa12.4□□□□□ -0.42
SIN3B-204ENST00000594372 TM7SF2O76062 418 aa12.39□□□□□ -0.43
SIN3B-204ENST00000594372 TMCC1O94876 653 aa12.39□□□□□ -0.43
SIN3B-204ENST00000594372 SRSF1Q07955 248 aaKnown RBP eCLIP12.39□□□□□ -0.43
SIN3B-204ENST00000594372 RAPGEF1Q13905 1077 aa12.39□□□□□ -0.43
SIN3B-204ENST00000594372 TBR1Q16650 682 aa12.39□□□□□ -0.43
SIN3B-204ENST00000594372 WSCD2Q2TBF2 565 aa12.39□□□□□ -0.43
SIN3B-204ENST00000594372 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
SIN3B-204ENST00000594372 GDPD4Q6W3E5 623 aa12.39□□□□□ -0.43
SIN3B-204ENST00000594372 PTRH1Q86Y79 214 aaKnown RBP12.39□□□□□ -0.43
SIN3B-204ENST00000594372 IRF2BP1Q8IU81 584 aa12.39□□□□□ -0.43
SIN3B-204ENST00000594372 CCDC185Q8N715 623 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms