RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 IFNB1P01574 187 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 CD1AP06126 327 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 TUBBP07437 444 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 C1QTNF9P0C862 333 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PDHBP11177 359 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 SAT1P21673 171 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 MCM3P25205 808 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 TMOD1P28289 359 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 TNFRSF8P28908 595 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 SREBF1P36956 1147 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PBX3P40426 434 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 NRIP1P48552 1158 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 SULT1E1P49888 294 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 NT5C2P49902 561 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 HNMTP50135 292 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 IL13RA1P78552 427 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 DMTNQ08495 405 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ITGA7Q13683 1181 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 RCN2Q14257 317 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 KCNAB1Q14722 419 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ANGPT1Q15389 498 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ZKSCAN8Q15776 578 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 LRRC24Q50LG9 513 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 NHSL2Q5HYW2 709 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 FCRL6Q6DN72 434 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ZCCHC12Q6PEW1 402 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 NCEH1Q6PIU2 408 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 FAM111BQ6SJ93 734 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ISLR2Q6UXK2 745 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 SYNE3Q6ZMZ3 975 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 RGS9BPQ6ZS82 235 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 CHST9Q7L1S5 443 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 CCDC105Q8IYK2 499 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 UNC5BQ8IZJ1 945 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PQLC1Q8N2U9 271 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 FAM71DQ8N9W8 422 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 OR52K2Q8NGK3 314 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 SETD6Q8TBK2 473 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ZCCHC10Q8TBK6 192 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PHOSPHO2Q8TCD6 241 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 KCNE4Q8WWG9 221 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PRPF31Q8WWY3 499 aaKnown RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 CPA5Q8WXQ8 436 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 CTNNBL1Q8WYA6 563 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 MRPS27Q92552 414 aaKnown RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 NLRP4Q96MN2 994 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 NAA11Q9BSU3 229 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 POLR3CQ9BUI4 534 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 HERC2P3Q9BVR0 1158 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 MS4A7Q9GZW8 240 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 INTS2Q9H0H0 1204 aaKnown RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 NT5C3AQ9H0P0 336 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 STN1Q9H668 368 aaKnown RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 TASP1Q9H6P5 420 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 KAT14Q9H8E8 782 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 VPS37BQ9H9H4 285 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 MRPL44Q9H9J2 332 aaKnown RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PCDH18Q9HCL0 1135 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ARHGEF3Q9NR81 526 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 SIRT3Q9NTG7 399 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ZBTB40Q9NUA8 1239 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 GIMAP4Q9NUV9 329 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ANO10Q9NW15 660 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 CHCHD3Q9NX63 227 aaKnown RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ZSCAN32Q9NX65 697 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 MIS18AQ9NYP9 233 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 SAE1Q9UBE0 346 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 EXTL2Q9UBQ6 330 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 LIPT1Q9Y234 373 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PCDHGA5Q9Y5G8 931 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PCDHGA1Q9Y5H4 931 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 PCDHA5Q9Y5H7 936 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 UMODL1Q5DID0 1318 aa4.34□□□□□ -1.71
LINC00649-204ENST00000593977 ZNFX1Q9P2E3 1918 aaKnown RBP4.34□□□□□ -1.71
LINC00649-204ENST00000593977 CREBBPQ92793 2442 aa4.34□□□□□ -1.72
LINC00649-204ENST00000593977 FBN2P35556 2912 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 CDK5RAP2Q96SN8 1893 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 ATP8B3O60423 1300 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 FAM237BA0A1B0GVD1 139 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 LRRD1A4D1F6 860 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 SLC15A5A6NIM6 579 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 GLOD5A6NK44 160 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 EFCAB8A8MWE9 144 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 KIF28PB7ZC32 967 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 ZNF263O14978 683 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 DHHO43323 396 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 LY86O95711 162 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 PGK1P00558 417 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 EIF2S1P05198 315 aaKnown RBP4.33□□□□□ -1.72
LINC00649-204ENST00000593977 INHBAP08476 426 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 SUPT20HL2P0C7V6 817 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 ARP10275 920 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 FDPSP14324 419 aaKnown RBP4.33□□□□□ -1.72
LINC00649-204ENST00000593977 CCNA2P20248 432 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 IL10P22301 178 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 PCSK1P29120 753 aa4.33□□□□□ -1.72
LINC00649-204ENST00000593977 MATR3P43243 847 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC00649-204ENST00000593977 RABIFP47224 123 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms