RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 COL6A6A6NMZ7 2263 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 AREL1O15033 823 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 C1QL1O75973 258 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 CHRNB2P17787 502 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 IGFALSP35858 605 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 KLK7P49862 253 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 YPEL5P62699 121 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 ATMQ13315 3056 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 LRRC73Q5JTD7 316 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 RBM44Q6ZP01 1051 aaKnown RBP22.95■■□□□ 1.26
SSBP4-203ENST00000593641 NAT6Q93015 286 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 TBATAQ96M53 351 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 SLC13A1Q9BZW2 595 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 TTYH3Q9C0H2 523 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 ADAM22Q9P0K1 906 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 SATB2Q9UPW6 733 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 DAAM1Q9Y4D1 1078 aa22.95■■□□□ 1.26
SSBP4-203ENST00000593641 TOR1BO14657 336 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 MMP20O60882 483 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 TCEA3O75764 348 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 ANXA6P08133 673 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 GPD1P21695 349 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 EPHB2P29323 1055 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 RBMS1P29558 406 aaKnown RBP22.94■■□□□ 1.26
SSBP4-203ENST00000593641 STAT1P42224 750 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 GSCP56915 257 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-203ENST00000593641 JAM2P57087 298 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 RHOAP61586 193 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 EFHC2Q5JST6 749 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 CRTC1Q6UUV9 634 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 SLFN11Q7Z7L1 901 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 RTL3Q8N8U3 475 aaKnown RBP22.94■■□□□ 1.26
SSBP4-203ENST00000593641 BOCQ9BWV1 1114 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 MAGEB5Q9BZ81 275 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 TCEAL2Q9H3H9 227 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-203ENST00000593641 ASCL3Q9NQ33 180 aa22.94■■□□□ 1.26
SSBP4-203ENST00000593641 ERVH48-1M5A8F1 160 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 MUSKO15146 869 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 KLK10O43240 276 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 CALB1P05937 261 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 UNGP13051 313 aaPredicted RBP22.93■■□□□ 1.26
SSBP4-203ENST00000593641 XPAP23025 273 aaPredicted RBP22.93■■□□□ 1.26
SSBP4-203ENST00000593641 RFC1P35251 1148 aaPredicted RBP22.93■■□□□ 1.26
SSBP4-203ENST00000593641 ADKP55263 362 aaKnown RBP22.93■■□□□ 1.26
SSBP4-203ENST00000593641 C1orf61Q13536 156 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 SYCP1Q15431 976 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 TAF1BQ53T94 588 aaPredicted RBP22.93■■□□□ 1.26
SSBP4-203ENST00000593641 INO80DQ53TQ3 878 aaPredicted RBP22.93■■□□□ 1.26
SSBP4-203ENST00000593641 C6orf132Q5T0Z8 1188 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 FAXCQ5TGI0 409 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 IGF2-ASQ6U949 168 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 MACC1Q6ZN28 852 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 WDR48Q8TAF3 677 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 ENOX1Q8TC92 643 aaKnown RBP22.93■■□□□ 1.26
SSBP4-203ENST00000593641 ATXN7L3BQ96GX2 97 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 VCPIP1Q96JH7 1222 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 EPAS1Q99814 870 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 NCAPGQ9BPX3 1015 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 LRRC61Q9BV99 259 aa22.93■■□□□ 1.26
SSBP4-203ENST00000593641 ZNF462Q96JM2 2506 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 LMO7DNF2Z398 122 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 GCATO75600 419 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 EIF4A3P38919 411 aaKnown RBP22.92■■□□□ 1.26
SSBP4-203ENST00000593641 PPARDQ03181 441 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 PTP4A2Q12974 167 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 KRT31Q15323 416 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 KLHL40Q2TBA0 621 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 ESRP1Q6NXG1 681 aaKnown RBP22.92■■□□□ 1.26
SSBP4-203ENST00000593641 SCYL2Q6P3W7 929 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 SLC35F3Q8IY50 421 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 C3orf20Q8ND61 904 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 VOPP1Q96AW1 172 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 WRAP53Q9BUR4 548 aaKnown RBP22.92■■□□□ 1.26
SSBP4-203ENST00000593641 DPH1Q9BZG8 443 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 CATSPERBQ9H7T0 1116 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 SEPT11Q9NVA2 429 aaKnown RBP22.92■■□□□ 1.26
SSBP4-203ENST00000593641 DKK3Q9UBP4 350 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 DOLKQ9UPQ8 538 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 MFHAS1Q9Y4C4 1052 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 ENTPD2Q9Y5L3 495 aa22.92■■□□□ 1.26
SSBP4-203ENST00000593641 ANKRD36A6QL64 1941 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 ANKRD62A6NC57 917 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 EPHB6O15197 1021 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 BLKP51451 505 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 YBEYP58557 167 aaPredicted RBP22.91■■□□□ 1.26
SSBP4-203ENST00000593641 RHDQ02161 417 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 ELP6Q0PNE2 266 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 PERM1Q5SV97 790 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 ARHGAP40Q5TG30 622 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 WDR59Q6PJI9 974 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 PHF13Q86YI8 300 aaPredicted RBP22.91■■□□□ 1.26
SSBP4-203ENST00000593641 PYROXD2Q8N2H3 581 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 PCMTD1Q96MG8 357 aaPredicted RBP22.91■■□□□ 1.26
SSBP4-203ENST00000593641 NOL6Q9H6R4 1146 aaKnown RBP22.91■■□□□ 1.26
SSBP4-203ENST00000593641 SYNDIG1Q9H7V2 258 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 CPNE5Q9HCH3 593 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 PCDHGA8Q9Y5G5 932 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 CFAP46Q8IYW2 2715 aa22.91■■□□□ 1.26
SSBP4-203ENST00000593641 CAPN8A6NHC0 703 aa22.9■■□□□ 1.26
SSBP4-203ENST00000593641 CREB3O43889 395 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms