RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ZNF354CQ86Y25 554 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 CCDC185Q8N715 623 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 TTC9Q92623 222 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 CCDC3Q9BQI4 270 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 WRAP53Q9BUR4 548 aaKnown RBP17.71■□□□□ 0.43
RETREG3-212ENST00000593251 MAGEH1Q9H213 219 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 SCN8AQ9UQD0 1980 aa17.71■□□□□ 0.43
RETREG3-212ENST00000593251 YY2O15391 372 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 RAMP2O60895 175 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 TM7SF2O76062 418 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 KRT10P13645 584 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 TSHRP16473 764 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 SDC4P31431 198 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 EIF4A3P38919 411 aaKnown RBP17.7■□□□□ 0.42
RETREG3-212ENST00000593251 PDX1P52945 283 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 GEMIN4P57678 1058 aaKnown RBP17.7■□□□□ 0.42
RETREG3-212ENST00000593251 UBE2HP62256 183 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 SKOR1P84550 965 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 NRG1Q02297 640 aaPredicted RBP17.7■□□□□ 0.42
RETREG3-212ENST00000593251 KLHL40Q2TBA0 621 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 DPCR1Q3MIW9 517 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 TP53I13Q8NBR0 393 aaPredicted RBP17.7■□□□□ 0.42
RETREG3-212ENST00000593251 TPCN2Q8NHX9 752 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 SLC30A5Q8TAD4 765 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 CXorf40AQ8TE69 158 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 GLMNQ92990 594 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 TBC1D31Q96DN5 1066 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 ARHGEF26Q96DR7 871 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 WBP1Q96G27 269 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 EPAS1Q99814 870 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 C11orf70Q9BRQ4 267 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 OSBPL1AQ9BXW6 950 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 SLC13A1Q9BZW2 595 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 KLC2Q9H0B6 622 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 NOCTQ9UK39 431 aaKnown RBP17.7■□□□□ 0.42
RETREG3-212ENST00000593251 PADI4Q9UM07 663 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 COQ6Q9Y2Z9 468 aa17.7■□□□□ 0.42
RETREG3-212ENST00000593251 CXorf51AA0A1B0GTR3 108 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 CDRT15L2A8MXV6 281 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 LMO7DNF2Z398 122 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 PYCARD-AS1I3L0S3 204 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 J3QKU1 62 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 BUB1O43683 1085 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 KDELR3O43731 214 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 TCEA3O75764 348 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 GFPT2O94808 682 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 TMCC1O94876 653 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 TNFSF15O95150 251 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 PLEKP08567 350 aaPredicted RBP17.69■□□□□ 0.42
RETREG3-212ENST00000593251 RPIAP49247 311 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 SPIDRQ14159 915 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 IRF4Q15306 451 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 MACC1Q6ZN28 852 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 NYAP1Q6ZVC0 841 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 PYROXD2Q8N2H3 581 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 WDR36Q8NI36 951 aaKnown RBP17.69■□□□□ 0.42
RETREG3-212ENST00000593251 FAM172AQ8WUF8 416 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 NAT6Q93015 286 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 GRAMD1AQ96CP6 724 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 GDAP1L1Q96MZ0 367 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 STK33Q9BYT3 514 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
RETREG3-212ENST00000593251 WDR70Q9NW82 654 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 SIRPGQ9P1W8 387 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 GULP1Q9UBP9 304 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 SSUH2Q9Y2M2 353 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 PCDHGA8Q9Y5G5 932 aa17.69■□□□□ 0.42
RETREG3-212ENST00000593251 CAPN8A6NHC0 703 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 C2CD4BA6NLJ0 364 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 INSIG1O15503 277 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 IGSF6O95976 241 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 CYP1A1P04798 512 aaPredicted RBP17.68■□□□□ 0.42
RETREG3-212ENST00000593251 TIMP2P16035 220 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 CHRNB2P17787 502 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 MMP8P22894 467 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 HDAC4P56524 1084 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 RHOAP61586 193 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 YPEL5P62699 121 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 FMO1Q01740 532 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 PPARDQ03181 441 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 ZSCAN23Q3MJ62 389 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 ESRP1Q6NXG1 681 aaKnown RBP17.68■□□□□ 0.42
RETREG3-212ENST00000593251 HID1Q8IV36 788 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 ARL14Q8N4G2 192 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 SNRNP27Q8WVK2 155 aaKnown RBP17.68■□□□□ 0.42
RETREG3-212ENST00000593251 TSACCQ96A04 125 aaPredicted RBP17.68■□□□□ 0.42
RETREG3-212ENST00000593251 TTYH3Q9C0H2 523 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 NOL6Q9H6R4 1146 aaKnown RBP17.68■□□□□ 0.42
RETREG3-212ENST00000593251 TAB2Q9NYJ8 693 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 RABGEF1Q9UJ41 708 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 DOLKQ9UPQ8 538 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 PIEZO2Q9H5I5 2752 aa17.68■□□□□ 0.42
RETREG3-212ENST00000593251 UNC13CQ8NB66 2214 aa17.67■□□□□ 0.42
RETREG3-212ENST00000593251 CCDC187A0A096LP49 1063 aa17.67■□□□□ 0.42
RETREG3-212ENST00000593251 K7ENP7 123 aa17.67■□□□□ 0.42
RETREG3-212ENST00000593251 RIOK3O14730 519 aaKnown RBP17.67■□□□□ 0.42
RETREG3-212ENST00000593251 PIGNO95427 931 aa17.67■□□□□ 0.42
RETREG3-212ENST00000593251 PTPN9P43378 593 aa17.67■□□□□ 0.42
RETREG3-212ENST00000593251 KLK7P49862 253 aa17.67■□□□□ 0.42
RETREG3-212ENST00000593251 CDR2Q01850 454 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms