RNA–Protein interactions for RNA: ENST00000593233.1

NDUFA11-206, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

TSL 3

Gene NDUFA11, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-206ENST00000593233 DPYSQ14117 519 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 ACAP1Q15027 740 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 ZNF542PQ5EBM4 170 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 TXNRD3NBQ6F5E7 133 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 KYAT3Q6YP21 454 aaKnown RBP16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 SLC25A45Q8N413 288 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 HSPH1Q92598 858 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 ARHGEF26Q96DR7 871 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 LENG8Q96PV6 779 aaPredicted RBP16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 NCAPGQ9BPX3 1015 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 CPEB1Q9BZB8 566 aaKnown RBP16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 ZWILCHQ9H900 591 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 GPR27Q9NS67 375 aa16.4■□□□□ 0.22
NDUFA11-206ENST00000593233 MYLKQ15746 1914 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 FAM149AA5PLN7 773 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 TRIM38O00635 465 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 FPGTO14772 594 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 BUB1BO60566 1050 aaPredicted RBP16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 CAPNS1P04632 268 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 CYP1A2P05177 515 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 RARAP10276 462 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 AMPD1P23109 780 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 DGKAP23743 735 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 ACADVLP49748 655 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 CLDN6P56747 220 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 PIGHQ14442 188 aaPredicted RBP16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 DPYSL2Q16555 572 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 SKOR2Q2VWA4 1001 aaPredicted RBP16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 TPRG1LQ5T0D9 272 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 CCDC122Q5T0U0 273 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 ZSCAN30Q86W11 494 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 TSEN2Q8NCE0 465 aaKnown RBP16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 FAM174AQ8TBP5 190 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 ASB12Q8WXK4 309 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 TSC1Q92574 1164 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 WRAP53Q9BUR4 548 aaKnown RBP16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 NUP85Q9BW27 656 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 SUV39H2Q9H5I1 410 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 SP110Q9HB58 689 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 ETNK2Q9NVF9 386 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 DKK3Q9UBP4 350 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 ANAPC7Q9UJX3 599 aa16.39■□□□□ 0.21
NDUFA11-206ENST00000593233 GOLGA4Q13439 2230 aaKnown RBP16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 H3BRJ5 948 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 FFAR2O15552 330 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 SIGLEC6O43699 453 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 RFPL3O75679 317 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 PALMO75781 387 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 PIAS2O75928 621 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 RABIFP47224 123 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 ZNF135P52742 658 aaPredicted RBP16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 FZD2Q14332 565 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 SMAD1Q15797 465 aaKnown RBP16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 BOLA3Q53S33 107 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 ALKBH5Q6P6C2 394 aaKnown RBP16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 POLNQ7Z5Q5 900 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 SRLQ86TD4 932 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 DCP2Q8IU60 420 aaKnown RBP16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 CAMK1DQ8IU85 385 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 GALNT15Q8N3T1 639 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 DENND6BQ8NEG7 585 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 CXorf40AQ8TE69 158 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 DNAJC28Q9NX36 388 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 IPO11Q9UI26 975 aaKnown RBP16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 NENFQ9UMX5 172 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 PCDHGA1Q9Y5H4 931 aa16.38■□□□□ 0.21
NDUFA11-206ENST00000593233 SPTY2D1-AS1A0A0U1RR47 76 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 TSPAN11A1L157 253 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 TAF4O00268 1085 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 MUSKO15146 869 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 TM7SF2O76062 418 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 PRKCGP05129 697 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 GIMD1P0DJR0 217 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 XPAP23025 273 aaPredicted RBP16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 IGFALSP35858 605 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 EIF4A3P38919 411 aaKnown RBP16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 ARL4AP40617 200 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 SEMG2Q02383 582 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 SLC25A11Q02978 314 aaKnown RBP16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 IL10RBQ08334 325 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 PDE1CQ14123 709 aaPredicted RBP16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 PROX2Q3B8N5 592 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 TMEM52BQ4KMG9 183 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 ZSWIM9Q86XI8 627 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 CPNE8Q86YQ8 564 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 NIPA2Q8N8Q9 360 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 CENPTQ96BT3 561 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 IFT43Q96FT9 208 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 CSPG4P5Q96PW8 444 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 CINPQ9BW66 212 aaPredicted RBP16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 PCDH18Q9HCL0 1135 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 MBNL1Q9NR56 388 aaKnown RBP16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 IP6K2Q9UHH9 426 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 COQ6Q9Y2Z9 468 aa16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.37■□□□□ 0.21
NDUFA11-206ENST00000593233 SRRM3A6NNA2 597 aaPredicted RBP16.36■□□□□ 0.21
NDUFA11-206ENST00000593233 CKMT2P17540 419 aa16.36■□□□□ 0.21
NDUFA11-206ENST00000593233 CSNK1DP48730 415 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms