RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ACVRL1P37023 503 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 AVPR1AP37288 418 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 KCNQ1P51787 676 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 ARHGAP8P85298 464 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 TMCO4Q5TGY1 634 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 LIPMQ5VYY2 423 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 OR13J1Q8NGT2 312 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 CALML6Q8TD86 181 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 GPR78Q96P69 363 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 CDH19Q9H159 772 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 PDFQ9HBH1 243 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 NOP53Q9NZM5 478 aaKnown RBP19.87■□□□□ 0.77
CLIP3-206ENST00000593074 AFF4Q9UHB7 1163 aaKnown RBP19.87■□□□□ 0.77
CLIP3-206ENST00000593074 DNMT3LQ9UJW3 386 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 CHD5Q8TDI0 1954 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.87■□□□□ 0.77
CLIP3-206ENST00000593074 LOC285095A0A1B0GVY8 99 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 RFC2P35250 354 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 PGGT1BP53609 377 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 POU4F1Q01851 419 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 UBAP2LQ14157 1087 aaKnown RBP19.87■□□□□ 0.77
CLIP3-206ENST00000593074 LRRC8EQ6NSJ5 796 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 RFWD3Q6PCD5 774 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 GALNT7Q86SF2 657 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 TMPRSS6Q8IU80 811 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 ZNF781Q8N8C0 355 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 PDZD8Q8NEN9 1154 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 DIS3LQ8TF46 1054 aaKnown RBP19.87■□□□□ 0.77
CLIP3-206ENST00000593074 OVCA2Q8WZ82 227 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 TOP1MTQ969P6 601 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 MCUR1Q96AQ8 359 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 VWCEQ96DN2 955 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 ZNF512Q96ME7 567 aaPredicted RBP19.87■□□□□ 0.77
CLIP3-206ENST00000593074 CLSTN3Q9BQT9 956 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 GATA5Q9BWX5 397 aaPredicted RBP19.87■□□□□ 0.77
CLIP3-206ENST00000593074 RETREG1Q9H6L5 497 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 UXTQ9UBK9 157 aaPredicted RBP19.87■□□□□ 0.77
CLIP3-206ENST00000593074 ATXN1LP0C7T5 689 aaKnown RBP19.86■□□□□ 0.77
CLIP3-206ENST00000593074 RCN2Q14257 317 aa19.86■□□□□ 0.77
CLIP3-206ENST00000593074 ZNF460Q14592 562 aa19.86■□□□□ 0.77
CLIP3-206ENST00000593074 SIRPB2Q5JXA9 342 aa19.86■□□□□ 0.77
CLIP3-206ENST00000593074 LGI2Q8N0V4 545 aa19.86■□□□□ 0.77
CLIP3-206ENST00000593074 FSTL5Q8N475 847 aaPredicted RBP19.86■□□□□ 0.77
CLIP3-206ENST00000593074 ZNF461Q8TAF7 563 aa19.86■□□□□ 0.77
CLIP3-206ENST00000593074 GABPB2Q8TAK5 448 aaPredicted RBP19.86■□□□□ 0.77
CLIP3-206ENST00000593074 ELMO2Q96JJ3 720 aa19.86■□□□□ 0.77
CLIP3-206ENST00000593074 POLR1EQ9GZS1 481 aaKnown RBP19.86■□□□□ 0.77
CLIP3-206ENST00000593074 RUVBL2Q9Y230 463 aaKnown RBP19.86■□□□□ 0.77
CLIP3-206ENST00000593074 A0A087X1B8 175 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 ABHD14A-ACY1A0A1B0GW23 586 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 B2RBV5 119 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 KLHL2O95198 593 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 SEC24AO95486 1093 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 SOD2P04179 222 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 SLC6A4P31645 630 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 CPA2P48052 419 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 TAS2R39P59534 338 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 TSNAXIP1Q2TAA8 658 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 ALG1LQ6GMV1 187 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 KLHDC10Q6PID8 442 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 ENDOVQ8N8Q3 282 aaKnown RBP19.85■□□□□ 0.77
CLIP3-206ENST00000593074 ZNF558Q96NG5 402 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 ZNF599Q96NL3 588 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 NACA2Q9H009 215 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 DRC3Q9H069 523 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 MICAL3Q7RTP6 2002 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 SPECC1L-ADORA2AF8WAN1 911 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 AURKAO14965 403 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 SLC7A4O43246 635 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 ACSL4O60488 711 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 ABLIM3O94929 683 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 CLTBP09497 229 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 ETFBP38117 255 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 GLRBP48167 497 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 LEPRP48357 1165 aaKnown RBP19.85■□□□□ 0.77
CLIP3-206ENST00000593074 DLG1Q12959 904 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 BTG3Q14201 252 aaPredicted RBP19.85■□□□□ 0.77
CLIP3-206ENST00000593074 GPATCH11Q8N954 259 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 RBM15BQ8NDT2 890 aaKnown RBP19.85■□□□□ 0.77
CLIP3-206ENST00000593074 TMEM169Q96HH4 297 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 OMDQ99983 421 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 C1orf21Q9H246 121 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 HSFX1Q9UBD0 423 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 XPR1Q9UBH6 696 aa19.85■□□□□ 0.77
CLIP3-206ENST00000593074 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.85■□□□□ 0.77
CLIP3-206ENST00000593074 TTC24A2A3L6 582 aaPredicted RBP19.84■□□□□ 0.77
CLIP3-206ENST00000593074 MUSKO15146 869 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 ENTPD5O75356 428 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 ANP32DO95626 131 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 CLCN5P51795 746 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 KDSRQ06136 332 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 USP4Q13107 963 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 HECTD3Q5T447 861 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 VWA5B1Q5TIE3 1220 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 TPGS2Q68CL5 300 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 FAM117BQ6P1L5 589 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 CNSTQ6PJW8 725 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 EPGNQ6UW88 154 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 ARHGAP24Q8N264 748 aa19.84■□□□□ 0.77
CLIP3-206ENST00000593074 FBXO27Q8NI29 283 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms