RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ANAPC7Q9UJX3 599 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 NENFQ9UMX5 172 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.05□□□□□ -0.165e-9■□□□□ 8.6
APOC1-208ENST00000592535 HS3ST3A1Q9Y663 406 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 KMT2BQ9UMN6 2715 aaPredicted RBP14.04□□□□□ -0.16
APOC1-208ENST00000592535 H3BRJ5 948 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 TPM3P06753 285 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 RARAP10276 462 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 TIMP2P16035 220 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 AMPD1P23109 780 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 EIF4A3P38919 411 aaKnown RBP14.04□□□□□ -0.16
APOC1-208ENST00000592535 ARL4AP40617 200 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 DNAJC3Q13217 504 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 SGCGQ13326 291 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 BOLA3Q53S33 107 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 KYAT3Q6YP21 454 aaKnown RBP14.04□□□□□ -0.16
APOC1-208ENST00000592535 KDM7AQ6ZMT4 941 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 NIPA2Q8N8Q9 360 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 KDF1Q8NAX2 398 aaPredicted RBP14.04□□□□□ -0.16
APOC1-208ENST00000592535 TSEN2Q8NCE0 465 aaKnown RBP14.04□□□□□ -0.16
APOC1-208ENST00000592535 TSPY26PQ9H489 355 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 GPR27Q9NS67 375 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.04□□□□□ -0.16
APOC1-208ENST00000592535 ETNK2Q9NVF9 386 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 IP6K2Q9UHH9 426 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 USP24Q9UPU5 2620 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 AKAP13Q12802 2813 aa14.04□□□□□ -0.16
APOC1-208ENST00000592535 TSPAN11A1L157 253 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 CBFA2T2O43439 604 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 BUB1BO60566 1050 aaPredicted RBP14.03□□□□□ -0.16
APOC1-208ENST00000592535 MMP20O60882 483 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 PALMO75781 387 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 HNRNPH3P31942 346 aaKnown RBP14.03□□□□□ -0.16
APOC1-208ENST00000592535 SLC25A11Q02978 314 aaKnown RBP14.03□□□□□ -0.16
APOC1-208ENST00000592535 IL10RBQ08334 325 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 ZNF542PQ5EBM4 170 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 DHRS13Q6UX07 377 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 CCNI2Q6ZMN8 369 aaPredicted RBP14.03□□□□□ -0.16
APOC1-208ENST00000592535 TMPRSS7Q7RTY8 843 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 POLNQ7Z5Q5 900 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 MARCH9Q86YJ5 346 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 SLC25A45Q8N413 288 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 FAM174AQ8TBP5 190 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 TEKT4Q8WW24 435 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 ASB12Q8WXK4 309 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 LENG8Q96PV6 779 aaPredicted RBP14.03□□□□□ -0.16
APOC1-208ENST00000592535 WRAP53Q9BUR4 548 aaKnown RBP14.03□□□□□ -0.16
APOC1-208ENST00000592535 SUV39H2Q9H5I1 410 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 PCDH18Q9HCL0 1135 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 UCKL1Q9NWZ5 548 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 IPO11Q9UI26 975 aaKnown RBP14.03□□□□□ -0.16
APOC1-208ENST00000592535 ZMIZ1Q9ULJ6 1067 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 GOLGA4Q13439 2230 aaKnown RBP14.03□□□□□ -0.16
APOC1-208ENST00000592535 FRYQ5TBA9 3013 aa14.03□□□□□ -0.16
APOC1-208ENST00000592535 TMEM8BA6NDV4 472 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 FPGTO14772 594 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 MUSKO15146 869 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 PIAS2O75928 621 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 XPAP23025 273 aaPredicted RBP14.02□□□□□ -0.17
APOC1-208ENST00000592535 DGKAP23743 735 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 IGFALSP35858 605 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 CSNK1DP48730 415 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 ACADVLP49748 655 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 FZD2Q14332 565 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 GRM3Q14832 879 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 TPRG1LQ5T0D9 272 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 SPECC1LQ69YQ0 1117 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 TMCO3Q6UWJ1 677 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 SRLQ86TD4 932 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 ZSWIM9Q86XI8 627 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 CPNE8Q86YQ8 564 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 DCP2Q8IU60 420 aaKnown RBP14.02□□□□□ -0.17
APOC1-208ENST00000592535 CAMK1DQ8IU85 385 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 LZTR1Q8N653 840 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 RNF214Q8ND24 703 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 DENND6BQ8NEG7 585 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 ZNF564Q8TBZ8 553 aaPredicted RBP14.02□□□□□ -0.17
APOC1-208ENST00000592535 CXorf40AQ8TE69 158 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 ZCCHC14Q8WYQ9 949 aaKnown RBP14.02□□□□□ -0.17
APOC1-208ENST00000592535 TSC1Q92574 1164 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 CSPG4P5Q96PW8 444 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 CINPQ9BW66 212 aaPredicted RBP14.02□□□□□ -0.17
APOC1-208ENST00000592535 PACSIN1Q9BY11 444 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 DNAJC28Q9NX36 388 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 PCDHGA1Q9Y5H4 931 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 IGF2RP11717 2491 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 MYLKQ15746 1914 aa14.02□□□□□ -0.17
APOC1-208ENST00000592535 SPEGQ15772 3267 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 SPTY2D1-AS1A0A0U1RR47 76 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 FAM149AA5PLN7 773 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 MYO1FO00160 1098 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 TRIM38O00635 465 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 FFAR2O15552 330 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 SIGLEC6O43699 453 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 RFPL3O75679 317 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 TM7SF2O76062 418 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 PRKCGP05129 697 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 SSR1P43307 286 aaKnown RBP14.01□□□□□ -0.17
APOC1-208ENST00000592535 RABIFP47224 123 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 CLDN6P56747 220 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms