RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 GDPD4Q6W3E5 623 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 TRIM69Q86WT6 500 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 TMTC1Q8IUR5 882 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 MAP7D3Q8IWC1 876 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 VOPP1Q96AW1 172 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 KLHL32Q96NJ5 620 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 MYOCQ99972 504 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 ZNF670Q9BS34 389 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 OSBPL1AQ9BXW6 950 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 HDAC8Q9BY41 377 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 PREBQ9HCU5 417 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 TOR4AQ9NXH8 423 aa14.11□□□□□ -0.15
CLIP3-205ENST00000592017 TPX2Q9ULW0 747 aaKnown RBP14.11□□□□□ -0.15
CLIP3-205ENST00000592017 A0A1W2PQU0 124 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 LRRD1A4D1F6 860 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 FAM221BA6H8Z2 402 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 GOLGA6L6A8MZA4 724 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 MAP3K6O95382 1288 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 LCA5LO95447 670 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 COMTP21964 271 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 IL4RP24394 825 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 NXPH1P58417 271 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 ZNF235Q14590 738 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 ODF2Q5BJF6 829 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 ANKRD20A8PQ5CZ79 823 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 ZNF805Q5CZA5 627 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 LRRC73Q5JTD7 316 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 TMCO4Q5TGY1 634 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 NCBP2-AS2Q69YL0 99 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 RAD9BQ6WBX8 426 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 SPATS2Q86XZ4 545 aaKnown RBP14.1□□□□□ -0.15
CLIP3-205ENST00000592017 GATAD2AQ86YP4 633 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 MFSD2AQ8NA29 543 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 TSEN2Q8NCE0 465 aaKnown RBP14.1□□□□□ -0.15
CLIP3-205ENST00000592017 FAM71BQ8TC56 605 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 ADAMTS14Q8WXS8 1223 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 RAPGEF5Q92565 580 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 KLK6Q92876 244 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 LRIG1Q96JA1 1093 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 ELF4Q99607 663 aaPredicted RBP14.1□□□□□ -0.15
CLIP3-205ENST00000592017 CDC6Q99741 560 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 BAG1Q99933 345 aaPredicted RBP14.1□□□□□ -0.15
CLIP3-205ENST00000592017 GOLPH3Q9H4A6 298 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 DMTF1Q9Y222 760 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 ITM2BQ9Y287 266 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 CA5BQ9Y2D0 317 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 MSRB2Q9Y3D2 182 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 EPN1Q9Y6I3 576 aaPredicted RBP14.1□□□□□ -0.15
CLIP3-205ENST00000592017 ZZEF1O43149 2961 aa14.1□□□□□ -0.15
CLIP3-205ENST00000592017 C16orf96A6NNT2 1141 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 NEMP1O14524 444 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 DFNA5O60443 496 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 BUB1BO60566 1050 aaPredicted RBP14.09□□□□□ -0.15
CLIP3-205ENST00000592017 PRLRP16471 622 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 FECHP22830 423 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 NUDT1P36639 197 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 ABL2P42684 1182 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 SLC1A1P43005 524 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 RGRP47804 291 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 RFTN1Q14699 578 aaPredicted RBP14.09□□□□□ -0.15
CLIP3-205ENST00000592017 LBRQ14739 615 aaKnown RBP14.09□□□□□ -0.15
CLIP3-205ENST00000592017 ZNF284Q2VY69 593 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 CFAP58Q5T655 872 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 SEL1L3Q68CR1 1132 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 PAF1Q8N7H5 531 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 ACRBPQ8NEB7 543 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 PCDH19Q8TAB3 1148 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.09□□□□□ -0.15
CLIP3-205ENST00000592017 SAP25Q8TEE9 199 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 NSMCE1Q8WV22 266 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 SKA1Q96BD8 255 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 GDF3Q9NR23 364 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 IMPACTQ9P2X3 320 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 SEPT3Q9UH03 358 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 FADS3Q9Y5Q0 445 aa14.09□□□□□ -0.15
CLIP3-205ENST00000592017 PRAMEF26H0Y7S4 382 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 SLC31A1O15431 190 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 DKK1O94907 266 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 XPAP23025 273 aaPredicted RBP14.08□□□□□ -0.16
CLIP3-205ENST00000592017 KDELR1P24390 212 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 GRK6P43250 576 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 NAP1L1P55209 391 aaKnown RBP14.08□□□□□ -0.16
CLIP3-205ENST00000592017 SLC10A7Q0GE19 358 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 TCEAL1Q15170 157 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 SETMARQ53H47 684 aaPredicted RBP14.08□□□□□ -0.16
CLIP3-205ENST00000592017 NEK5Q6P3R8 708 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 KIAA1328Q86T90 577 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 HORMAD1Q86X24 394 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 RHOT1Q8IXI2 618 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 KDF1Q8NAX2 398 aaPredicted RBP14.08□□□□□ -0.16
CLIP3-205ENST00000592017 TMEM145Q8NBT3 493 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
CLIP3-205ENST00000592017 ZNF599Q96NL3 588 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 ERVMER34-1Q9H9K5 563 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 FZD3Q9NPG1 666 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 GGT7Q9UJ14 662 aa14.08□□□□□ -0.16
CLIP3-205ENST00000592017 ZFR2Q9UPR6 939 aaKnown RBP14.08□□□□□ -0.16
CLIP3-205ENST00000592017 APOBEC2Q9Y235 224 aaKnown RBP14.08□□□□□ -0.16
CLIP3-205ENST00000592017 A0A0A6YYK5 440 aaPredicted RBP14.07□□□□□ -0.16
CLIP3-205ENST00000592017 RCCD1A6NED2 376 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms