RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 IKBIPQ70UQ0 350 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 PIWIL2Q8TC59 973 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 SOHLH2Q9NX45 425 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CLUHO75153 1309 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 H0YC42 278 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 HS6ST1O60243 411 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 CNPP09543 421 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 MYL12AP19105 171 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 TAF10Q12962 218 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 GRM3Q14832 879 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 C15orf59Q2T9L4 293 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 OTUD3Q5T2D3 398 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 ATAD3BQ5T9A4 648 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 NEK10Q6ZWH5 1172 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 MARK2Q7KZI7 788 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 METTL6Q8TCB7 284 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 IL22Q9GZX6 179 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 CRYL1Q9Y2S2 319 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 CACNB4O00305 520 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 KDELR1P24390 212 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 IL12RB1P42701 662 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 C8orf59Q8N0T1 100 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 ENKURQ8TC29 256 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 SPACA7Q96KW9 195 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 TRMT13Q9NUP7 481 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 MAFBQ9Y5Q3 323 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 SLIT2O94813 1529 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 GRM6O15303 877 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 ACRP10323 421 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 DGKAP23743 735 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 ADARP55265 1226 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 ATP1A4Q13733 1029 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 NDUFA5Q16718 116 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 MILR1Q7Z6M3 343 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 C12orf56Q8IXR9 622 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 KAT5Q92993 513 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 LRMDAQ9H2I8 198 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 POMKQ9H5K3 350 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 Q9Y3F1 56 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 MRPL42Q9Y6G3 142 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 NEDD8-MDP1E9PL57 170 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 PEX10O60683 326 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 STX11O75558 287 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 PROCP04070 461 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 FYNP06241 537 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 HOXB6P17509 224 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 LBPP18428 481 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 HPCAL1P37235 193 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 SQLEQ14534 574 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 FAM187BQ17R55 369 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 ZNF605Q86T29 641 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 LRRN4CLQ8ND94 238 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 TRPC4APQ8TEL6 797 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 PRCCQ92733 491 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 HDHD2Q9H0R4 259 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 GPSM3Q9Y4H4 160 aa13.42□□□□□ -0.26
SMARCA4-216ENST00000591545 CLDN5O00501 218 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 MYL12BO14950 172 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 GUCY1B2O75343 617 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 MATKP42679 507 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 XIAPP98170 497 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 PFKPQ01813 784 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 NEDD8Q15843 81 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 PDK4Q16654 411 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 BMT2Q1RMZ1 405 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 INO80DQ53TQ3 878 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 SWT1Q5T5J6 900 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 PRR23CQ6ZRP0 262 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 EPHX4Q8IUS5 362 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 POU5F2Q8N7G0 328 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 ATAD1Q8NBU5 361 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 MFSD14AQ96MC6 490 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 LRRC19Q9H756 370 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 ASB8Q9H765 288 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 TSPAN1O60635 241 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 AUHQ13825 339 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 PAGE2BQ5JRK9 111 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 HYIQ5T013 277 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 ULK2Q8IYT8 1036 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 MCCC1Q96RQ3 725 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 C6orf62Q9GZU0 229 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 ABCG4Q9H172 646 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 CATSPERZQ9NTU4 200 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 LINC00854A0A1B0GVQ3 168 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 PIGNO95427 931 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 JAK1P23458 1154 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 S100A3P33764 101 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 EIF2B2P49770 351 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 RDH11Q8TC12 318 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 CLEC4DQ8WXI8 215 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 CHST7Q9NS84 486 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 ARMCX1Q9P291 453 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 TRPC4Q9UBN4 977 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 ATXN2Q99700 1313 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 SEC22BO75396 215 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 CLDN11O75508 207 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms