RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SLC30A5Q8TAD4 765 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 SLC20A1Q8WUM9 679 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 NTAN1Q96AB6 310 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 APOLD1Q96LR9 279 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 MYOCQ99972 504 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 CALN1Q9BXU9 219 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 RAB6CQ9H0N0 254 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 METTL5Q9NRN9 209 aaKnown RBP10.57□□□□□ -0.72
VPS4B-207ENST00000591519 HPCAL4Q9UM19 191 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 ACTL7AQ9Y615 435 aa10.57□□□□□ -0.72
VPS4B-207ENST00000591519 LY6G6EA0A0G2JKS1 128 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 ZSCAN5CA6NGD5 496 aaPredicted RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 C16orf96A6NNT2 1141 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 FAM72CH0Y354 149 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 K7ESM1 405 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 TERTO14746 1132 aaKnown RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 TPP1O14773 563 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 AREL1O15033 823 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 RRP8O43159 456 aaKnown RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 TEX33O43247 280 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 WIPF1O43516 503 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 OPA1O60313 960 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 GFPT2O94808 682 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 GSRP00390 522 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 SERPINC1P01008 464 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 ALPPL2P10696 532 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 KRT3P12035 628 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 NME1P15531 152 aaKnown RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 ITPKBP27987 946 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 RFC1P35251 1148 aaPredicted RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 STAT1P42224 750 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 DUSP3P51452 185 aaPredicted RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 PFN3P60673 137 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 SNRPD1P62314 119 aaKnown RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 DAB2P98082 770 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 SGCGQ13326 291 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 POLD3Q15054 466 aaPredicted RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 INO80DQ53TQ3 878 aaPredicted RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 FAM72AQ5TYM5 149 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 FAM72DQ6L9T8 149 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 LRRC69Q6ZNQ3 347 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 PARS2Q7L3T8 475 aaKnown RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 APTXQ7Z2E3 356 aaKnown RBP10.56□□□□□ -0.72
VPS4B-207ENST00000591519 FAM72BQ86X60 149 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 DENND6BQ8NEG7 585 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 CASKIN2Q8WXE0 1202 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 CENPTQ96BT3 561 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 ARHGEF26Q96DR7 871 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 PCDHB18PQ96TA0 734 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 OSBPL1AQ9BXW6 950 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 MAGEB5Q9BZ81 275 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 PRORYQ9H606 182 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 DNAI1Q9UI46 699 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 SALL4Q9UJQ4 1053 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 SIK3Q9Y2K2 1263 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 MFHAS1Q9Y4C4 1052 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 U3KQA8 63 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 LOC400499M0QZD8 3231 aa10.56□□□□□ -0.72
VPS4B-207ENST00000591519 TCRBV5S1A1TA0A578 114 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 IGLON5A6NGN9 336 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 SIGLEC16A6NMB1 481 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 WASH4PA8MWX3 477 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 GOLGA6L19H0YKK7 550 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 TOR1BO14657 336 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 FPGTO14772 594 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 FFAR2O15552 330 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 BRINP1O60477 761 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 RAMP2O60895 175 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 ACTN2P35609 894 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 ABL2P42684 1182 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 YBEYP58557 167 aaPredicted RBP10.55□□□□□ -0.72
VPS4B-207ENST00000591519 TPM4P67936 248 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 CDO1Q16878 200 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 TBC1D25Q3MII6 688 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 ZNF542PQ5EBM4 170 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 RWDD4Q6NW29 188 aaKnown RBP10.55□□□□□ -0.72
VPS4B-207ENST00000591519 ZCCHC8Q6NZY4 707 aaKnown RBP10.55□□□□□ -0.72
VPS4B-207ENST00000591519 WDR59Q6PJI9 974 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 SLFN11Q7Z7L1 901 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 PARGQ86W56 976 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 LSMEM2Q8N112 164 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 CCDC185Q8N715 623 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 RNF214Q8ND24 703 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 LSM14AQ8ND56 463 aaKnown RBP10.55□□□□□ -0.72
VPS4B-207ENST00000591519 HCAR2Q8TDS4 363 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 FAM172AQ8WUF8 416 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 BAP1Q92560 729 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 GRAMD1AQ96CP6 724 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 TBC1D31Q96DN5 1066 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 CRELD1Q96HD1 420 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 TBATAQ96M53 351 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 NAP1L5Q96NT1 182 aaPredicted RBP10.55□□□□□ -0.72
VPS4B-207ENST00000591519 UBL7Q96S82 380 aaPredicted RBP10.55□□□□□ -0.72
VPS4B-207ENST00000591519 C11orf70Q9BRQ4 267 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 TM6SF2Q9BZW4 377 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 TSPY26PQ9H489 355 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 NOL6Q9H6R4 1146 aaKnown RBP10.55□□□□□ -0.72
VPS4B-207ENST00000591519 ZDHHC6Q9H6R6 413 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 CAAP1Q9H8G2 361 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 EVA1BQ9NVM1 165 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms