RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ILVBLA1L0T0 632 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ANTXRLA6NF34 631 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 DRGXA6NNA5 263 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 USP27XA6NNY8 438 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 MIF4GDA9UHW6 222 aaKnown RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 RASA4BC9J798 803 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 APOL1O14791 398 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 RASA4O43374 803 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 KIF5CO60282 957 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 SNAP91O60641 907 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 LILRB5O75023 590 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 DLGAP3O95886 979 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ATP5BP06576 529 aaKnown RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 CISD3P0C7P0 127 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 CHRNB1P11230 501 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 EPXP11678 715 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 HLA-EP13747 358 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 HOXB2P14652 356 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ERCC2P18074 760 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 GLDCP23378 1020 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 PRKCHP24723 683 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 CTNNA2P26232 953 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF135P52742 658 aaPredicted RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ST8SIA6P61647 398 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ETF1P62495 437 aaKnown RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 DMC1Q14565 340 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF234Q14588 700 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 STARD3Q14849 445 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 POLD3Q15054 466 aaPredicted RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 PDK2Q15119 407 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 PARP15Q460N3 678 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 C5orf22Q49AR2 442 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 FBXO43Q4G163 708 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ANKRD20A8PQ5CZ79 823 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 TMEM31Q5JXX7 168 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 SEL1L2Q5TEA6 688 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 LRRC38Q5VT99 294 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 TMEM215Q68D42 235 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 MFSD7Q6UXD7 560 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 SPOCD1Q6ZMY3 1216 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 SLCO4C1Q6ZQN7 724 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 C8orf86Q6ZUL3 223 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 TRMT11Q7Z4G4 463 aaKnown RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 SETD3Q86TU7 594 aaPredicted RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 NT5DC3Q86UY8 548 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 KATNAL2Q8IYT4 538 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 APCDD1Q8J025 514 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 RNF10Q8N5U6 811 aaKnown RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 TMEM105Q8N8V8 129 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 TXNDC5Q8NBS9 432 aaKnown RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 GALNT11Q8NCW6 608 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 TRIM58Q8NG06 486 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 USP33Q8TEY7 942 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 NINJ1Q92982 152 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 RPL10LQ96L21 214 aaKnown RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ETNK2Q9NVF9 386 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 POLR3BQ9NW08 1133 aaPredicted RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ELOVL2Q9NXB9 296 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 RCOR3Q9P2K3 495 aaPredicted RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF212Q9UDV6 495 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 VPS51Q9UID3 782 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 GDF2Q9UK05 429 aaPredicted RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 HPCAL4Q9UM19 191 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 SLC27A6Q9Y2P4 619 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 HEY1Q9Y5J3 304 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 RAD54BQ9Y620 910 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 MYO18AQ92614 2054 aaKnown RBP6.53□□□□□ -1.36
VPS4B-205ENST00000591383 CCDC163A0A0D9SF12 145 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 LOC100289279A0A1B0GTE1 492 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 TCRBV21S2A2A0A5A6 115 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 CCDC66A2RUB6 948 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 GOLGA6L9A6NEM1 432 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 ARHGAP42A6NI28 874 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 K7EQS6 105 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 KCNK3O14649 394 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 DCLK1O15075 740 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 PI15O43692 258 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 ASLP04424 464 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 EPHX1P07099 455 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 DLDP09622 509 aaKnown RBP6.52□□□□□ -1.37
VPS4B-205ENST00000591383 KRT10P13645 584 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 KDELR1P24390 212 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 MSNP26038 577 aaKnown RBP6.52□□□□□ -1.37
VPS4B-205ENST00000591383 CETN2P41208 172 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 IL12RB1P42701 662 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 CDKN2BP42772 138 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 MAGEA9P43362 315 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 TNFRSF4P43489 277 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 ARSEP51690 589 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 CLCN5P51795 746 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 RWDD2BP57060 319 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 ECT2LQ008S8 904 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 SATB1Q01826 763 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 GBE1Q04446 702 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 SULT2A1Q06520 285 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 MTAPQ13126 283 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 SLC12A1Q13621 1099 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 SETDB1Q15047 1291 aa6.52□□□□□ -1.37
VPS4B-205ENST00000591383 ACCSLQ4AC99 568 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms