RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ZNF641Q96N77 438 aaPredicted RBP9.3□□□□□ -0.92
DNMT1-223ENST00000591239 RNF157Q96PX1 679 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 PSKH2Q96QS6 385 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 TUBGCP5Q96RT8 1024 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 SLC17A9Q9BYT1 436 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 SUV39H2Q9H5I1 410 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 IMPACTQ9P2X3 320 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 DKK3Q9UBP4 350 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 TFR2Q9UP52 801 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 ITM2BQ9Y287 266 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 FNDC3AQ9Y2H6 1198 aaKnown RBP9.3□□□□□ -0.92
DNMT1-223ENST00000591239 HYOU1Q9Y4L1 999 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 DOCK9Q9BZ29 2069 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 A0A0A6YYK5 440 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 MED19A0JLT2 244 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 LRRD1A4D1F6 860 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 IGLON5A6NGN9 336 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 C3orf70A6NLC5 250 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 ZNF487B1APH4 448 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 TLR4O00206 839 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 KCNK3O14649 394 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 GIPC1O14908 333 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 AREL1O15033 823 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 SPINT1O43278 529 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 SPOPO43791 374 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 DFNA5O60443 496 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 IPO7O95373 1038 aaKnown RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 PAK4O96013 591 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 ZNF883P0CG24 379 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 CEACAM1P13688 526 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 TNNT1P13805 278 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 TIMP2P16035 220 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 CSRP1P21291 193 aaKnown RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 COMTP21964 271 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 HNRNPA2B1P22626 353 aaKnown RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 SERPINA4P29622 427 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 AKT2P31751 481 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 GARSP41250 739 aaKnown RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 SCNN1BP51168 640 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 NOVA1P51513 510 aaKnown RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 GALNT2Q10471 571 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 OVGP1Q12889 678 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 FGL2Q14314 439 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 ZNF235Q14590 738 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 SLC45A4Q5BKX6 768 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 LRRC73Q5JTD7 316 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 MARC1Q5VT66 337 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 BRAT1Q6PJG6 821 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 RAD9BQ6WBX8 426 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 IQCHQ86VS3 1027 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 ZSCAN30Q86W11 494 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 VSIG1Q86XK7 387 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 CAMK1DQ8IU85 385 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 RHOT1Q8IXI2 618 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 PQLC3Q8N755 202 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 EFCAB3Q8N7B9 438 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 SPC24Q8NBT2 197 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 TMEM145Q8NBT3 493 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 DEFB124Q8NES8 71 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 HCAR2Q8TDS4 363 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 NSMCE1Q8WV22 266 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 BAG1Q99933 345 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 SLC32A1Q9H598 525 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 ATP13A3Q9H7F0 1226 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 FZD3Q9NPG1 666 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 GDF3Q9NR23 364 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 TM7SF3Q9NS93 570 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 DDX56Q9NY93 547 aaKnown RBP9.29□□□□□ -0.92
DNMT1-223ENST00000591239 GGT7Q9UJ14 662 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 CA5BQ9Y2D0 317 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 ALG6Q9Y672 507 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 TRPM6Q9BX84 2022 aa9.29□□□□□ -0.92
DNMT1-223ENST00000591239 NCOR2Q9Y618 2525 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 TSPAN11A1L157 253 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 TTC24A2A3L6 582 aaPredicted RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 H0Y8X5 98 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 SH3BP5O60239 455 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 MAGEC1O60732 1142 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 MAP3K6O95382 1288 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 KRT1P04264 644 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 ITIH2P19823 946 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 XPAP23025 273 aaPredicted RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 CCNCP24863 283 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 HSPA9P38646 679 aaKnown RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 MMP13P45452 471 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 SUOXP51687 545 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 NXPH1P58417 271 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 AP1S1P61966 158 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 GBE1Q04446 702 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 BCL2L1Q07817 233 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 SLC10A2Q12908 348 aaPredicted RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 SGCGQ13326 291 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 HNRNPDQ14103 355 aaKnown RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 IFI16Q16666 785 aaKnown RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 UGP2Q16851 508 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 ZNF423Q2M1K9 1284 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 ODF2Q5BJF6 829 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 PRAMEF14Q5SWL7 426 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 CFAP58Q5T655 872 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms