RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 KDF1Q8NAX2 398 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-226ENST00000590171 FAM174AQ8TBP5 190 aa20.83■□□□□ 0.93
CIRBP-226ENST00000590171 ASB12Q8WXK4 309 aa20.83■□□□□ 0.93
CIRBP-226ENST00000590171 LENG8Q96PV6 779 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-226ENST00000590171 SP110Q9HB58 689 aa20.83■□□□□ 0.93
CIRBP-226ENST00000590171 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.83■□□□□ 0.93
CIRBP-226ENST00000590171 KLHL11Q9NVR0 708 aa20.83■□□□□ 0.93
CIRBP-226ENST00000590171 IP6K2Q9UHH9 426 aa20.83■□□□□ 0.93
CIRBP-226ENST00000590171 CABIN1Q9Y6J0 2220 aa20.83■□□□□ 0.93
CIRBP-226ENST00000590171 KMT2BQ9UMN6 2715 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-226ENST00000590171 H3BRJ5 948 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 KRT37O76014 449 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 TIMP2P16035 220 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 SLC25A11Q02978 314 aaKnown RBP20.82■□□□□ 0.92
CIRBP-226ENST00000590171 DNAJC3Q13217 504 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 SGCGQ13326 291 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 CCNI2Q6ZMN8 369 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-226ENST00000590171 KDM7AQ6ZMT4 941 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 TMPRSS7Q7RTY8 843 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 POLNQ7Z5Q5 900 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 TSEN2Q8NCE0 465 aaKnown RBP20.82■□□□□ 0.92
CIRBP-226ENST00000590171 TSPY26PQ9H489 355 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 ETNK2Q9NVF9 386 aa20.82■□□□□ 0.92
CIRBP-226ENST00000590171 TSPAN11A1L157 253 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 TMEM8BA6NDV4 472 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 CBFA2T2O43439 604 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 MMP20O60882 483 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 PALMO75781 387 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 AMPD1P23109 780 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 EIF4A3P38919 411 aaKnown RBP20.81■□□□□ 0.92
CIRBP-226ENST00000590171 ARL4AP40617 200 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 IL10RBQ08334 325 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 SPECC1LQ69YQ0 1117 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 SLC25A45Q8N413 288 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 LZTR1Q8N653 840 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 DENND6BQ8NEG7 585 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 TEKT4Q8WW24 435 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 CSPG4P5Q96PW8 444 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 SUV39H2Q9H5I1 410 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 PCDH18Q9HCL0 1135 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 UCKL1Q9NWZ5 548 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 IPO11Q9UI26 975 aaKnown RBP20.81■□□□□ 0.92
CIRBP-226ENST00000590171 ZMIZ1Q9ULJ6 1067 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 USP24Q9UPU5 2620 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 ASPMQ8IZT6 3477 aa20.81■□□□□ 0.92
CIRBP-226ENST00000590171 AKAP13Q12802 2813 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 FPGTO14772 594 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 BUB1BO60566 1050 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-226ENST00000590171 DGKAP23743 735 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 RABIFP47224 123 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 ACADVLP49748 655 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 GRM3Q14832 879 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 TPRG1LQ5T0D9 272 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 DHRS13Q6UX07 377 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 ZSWIM9Q86XI8 627 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 DCP2Q8IU60 420 aaKnown RBP20.8■□□□□ 0.92
CIRBP-226ENST00000590171 CAMK1DQ8IU85 385 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 HCAR2Q8TDS4 363 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 CXorf40AQ8TE69 158 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 ZCCHC14Q8WYQ9 949 aaKnown RBP20.8■□□□□ 0.92
CIRBP-226ENST00000590171 TSC1Q92574 1164 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 TUBGCP5Q96RT8 1024 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 DNAJC7Q99615 494 aa20.8■□□□□ 0.92
CIRBP-226ENST00000590171 WRAP53Q9BUR4 548 aaKnown RBP20.8■□□□□ 0.92
CIRBP-226ENST00000590171 CINPQ9BW66 212 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-226ENST00000590171 MYO1FO00160 1098 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 TRIM38O00635 465 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 MUSKO15146 869 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 PIAS2O75928 621 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 TM7SF2O76062 418 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 CSNK1DP48730 415 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 PFN3P60673 137 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 TRIM14Q14142 442 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 FZD2Q14332 565 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 RFTN1Q14699 578 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-226ENST00000590171 SMAD1Q15797 465 aaKnown RBP20.79■□□□□ 0.92
CIRBP-226ENST00000590171 UGP2Q16851 508 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 ASTE1Q2TB18 679 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-226ENST00000590171 ZNF542PQ5EBM4 170 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 TMCO3Q6UWJ1 677 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 SRLQ86TD4 932 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 MARCH9Q86YJ5 346 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 CPNE8Q86YQ8 564 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 RNF214Q8ND24 703 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 ZNF564Q8TBZ8 553 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-226ENST00000590171 CENPTQ96BT3 561 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 IFT43Q96FT9 208 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 ZNF641Q96N77 438 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-226ENST00000590171 PACSIN1Q9BY11 444 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 DNAJC28Q9NX36 388 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 PCDHGA1Q9Y5H4 931 aa20.79■□□□□ 0.92
CIRBP-226ENST00000590171 SPTY2D1-AS1A0A0U1RR47 76 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 RFPL3O75679 317 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 GIMD1P0DJR0 217 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 XPAP23025 273 aaPredicted RBP20.78■□□□□ 0.92
CIRBP-226ENST00000590171 IGFALSP35858 605 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 SUOXP51687 545 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 SLC10A7Q0GE19 358 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 ELP6Q0PNE2 266 aa20.78■□□□□ 0.92
CIRBP-226ENST00000590171 PDE1CQ14123 709 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms