RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 GDF3Q9NR23 364 aa14.26□□□□□ -0.13
CLPTM1-210ENST00000589158 DKK3Q9UBP4 350 aa14.26□□□□□ -0.13
CLPTM1-210ENST00000589158 GGT7Q9UJ14 662 aa14.26□□□□□ -0.13
CLPTM1-210ENST00000589158 IGLON5A6NGN9 336 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 UPK3BL1B0FP48 263 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 UPK3BL2E5RIL1 263 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 MUSKO15146 869 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 SH3BP5O60239 455 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 BUB1BO60566 1050 aaPredicted RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 MAP3K6O95382 1288 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 PEX11BO96011 259 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 PAK4O96013 591 aaPredicted RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 CEACAM1P13688 526 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 ITIH2P19823 946 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 COMTP21964 271 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 HNRNPA2B1P22626 353 aaKnown RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 CDC25BP30305 580 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 IL9RQ01113 521 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 BCL2L1Q07817 233 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 NSUN2Q08J23 767 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 SUZ12Q15022 739 aaKnown RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 PAFAH1B3Q15102 231 aaKnown RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 ZNF423Q2M1K9 1284 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 MARC1Q5VT66 337 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 LRRC38Q5VT99 294 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 PIP4P1Q86T03 277 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 LRRC49Q8IUZ0 686 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 NAXDQ8IW45 347 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 HCAR2Q8TDS4 363 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 SETD7Q8WTS6 366 aaKnown RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 FAF2Q96CS3 445 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 KLHDC7BQ96G42 594 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 RNF157Q96PX1 679 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 TUBGCP5Q96RT8 1024 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 BAG1Q99933 345 aaPredicted RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 MAK16Q9BXY0 300 aaKnown RBP14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 CEP192Q8TEP8 1941 aa14.25□□□□□ -0.13
CLPTM1-210ENST00000589158 PCDH15Q96QU1 1955 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 TTC24A2A3L6 582 aaPredicted RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 AREL1O15033 823 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 DFNA5O60443 496 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 MAGEC1O60732 1142 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 MMP20O60882 483 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 ZNF883P0CG24 379 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 FECHP22830 423 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 HSPA9P38646 679 aaKnown RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 GARSP41250 739 aaKnown RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 MMP13P45452 471 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 CCT8P50990 548 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 SUOXP51687 545 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 HADHBP55084 474 aaKnown RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 CLDN2P57739 230 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 NXPH1P58417 271 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 AP1S1P61966 158 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 GBE1Q04446 702 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 GALNT2Q10471 571 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 OVGP1Q12889 678 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 N4BP2L1Q5TBK1 243 aaPredicted RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 ERAP2Q6P179 960 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 BRAT1Q6PJG6 821 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 RAD9BQ6WBX8 426 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 IQCHQ86VS3 1027 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 ZSCAN30Q86W11 494 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 PQLC3Q8N755 202 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 CXorf40AQ8TE69 158 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 RNF25Q96BH1 459 aaPredicted RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 CAMK1GQ96NX5 476 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 ELF4Q99607 663 aaPredicted RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 WRAP53Q9BUR4 548 aaKnown RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 SCUBE2Q9NQ36 999 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 DDX56Q9NY93 547 aaKnown RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 IMPACTQ9P2X3 320 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 PCDHB9Q9Y5E1 797 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 ALG6Q9Y672 507 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 NYNRINQ9P2P1 1898 aaKnown RBP14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 NUMA1Q14980 2115 aa14.24□□□□□ -0.13
CLPTM1-210ENST00000589158 A0A0A6YYK5 440 aaPredicted RBP14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 GOLGA6L6A8MZA4 724 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 SPINT1O43278 529 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 NEBLO76041 1014 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 THEGLP0DJG4 465 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 MX2P20592 715 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 NAP1L1P55209 391 aaKnown RBP14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 MAXP61244 160 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 ITKQ08881 620 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 ELP6Q0PNE2 266 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 FGL2Q14314 439 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 IFI16Q16666 785 aaKnown RBP14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 UGP2Q16851 508 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 TIGD7Q6NT04 549 aaPredicted RBP14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 SPATS2Q86XZ4 545 aaKnown RBP14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 PGBD5Q8N414 524 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 TMEM145Q8NBT3 493 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 CCNYQ8ND76 341 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 ZNF830Q96NB3 372 aaPredicted RBP14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 C1QTNF2Q9BXJ5 285 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 GOLPH3Q9H4A6 298 aa14.23□□□□□ -0.13
CLPTM1-210ENST00000589158 NT5MQ9NPB1 228 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms