RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 ACOX2Q99424 681 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 SLC2A4RGQ9NR83 387 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.65□□□□□ -0.06
NPC1-207ENST00000588867 PIGNO95427 931 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 MGAT1P26572 445 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 TIE1P35590 1138 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 MAPK8P45983 427 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 VASPP50552 380 aaPredicted RBP14.65□□□□□ -0.06
NPC1-207ENST00000588867 PMS2P54278 862 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 CRADDP78560 199 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 BCL2L1Q07817 233 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 GRSF1Q12849 480 aaKnown RBP eCLIP14.65□□□□□ -0.06
NPC1-207ENST00000588867 TRAF2Q12933 501 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 GALNT3Q14435 633 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 FASTKD3Q14CZ7 662 aaKnown RBP14.65□□□□□ -0.06
NPC1-207ENST00000588867 SLC1A5Q15758 541 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 DNAJC21Q5F1R6 531 aaKnown RBP14.65□□□□□ -0.06
NPC1-207ENST00000588867 CASC4Q6P4E1 433 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 ZNF513Q8N8E2 541 aaPredicted RBP14.65□□□□□ -0.06
NPC1-207ENST00000588867 CHST14Q8NCH0 376 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 PYROXD1Q8WU10 500 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 UBLCP1Q8WVY7 318 aaPredicted RBP14.65□□□□□ -0.06
NPC1-207ENST00000588867 PTPRN2Q92932 1015 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 RMDN1Q96DB5 314 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 ERLEC1Q96DZ1 483 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 FEM1CQ96JP0 617 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 C9orf72Q96LT7 481 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 SEMA4AQ9H3S1 761 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 CACNA2D2Q9NY47 1150 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 BFARQ9NZS9 450 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 THAP10Q9P2Z0 257 aaPredicted RBP14.65□□□□□ -0.06
NPC1-207ENST00000588867 HCN2Q9UL51 889 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 MAD1L1Q9Y6D9 718 aa14.65□□□□□ -0.06
NPC1-207ENST00000588867 ATG2BQ96BY7 2078 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 COL4A2P08572 1712 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 LOC285095A0A1B0GVY8 99 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 SDR42E2A6NKP2 422 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 EIF3HO15372 352 aaKnown RBP eCLIP14.64□□□□□ -0.07
NPC1-207ENST00000588867 EGFP01133 1207 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 PDHA1P08559 390 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 GLULP15104 373 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 CD72P21854 359 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 CA4P22748 312 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 ELK3P41970 407 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 IL12RB1P42701 662 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 WASP42768 502 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 SLC14A2Q15849 920 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 C2orf27AQ580R0 203 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 SIRPB2Q5JXA9 342 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 CERCAMQ5T4B2 595 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 DENND5AQ6IQ26 1287 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 FSTL4Q6MZW2 842 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 TPRG1Q6ZUI0 275 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 CHPFQ8IZ52 775 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 MPP5Q8N3R9 675 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 KDM1BQ8NB78 822 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 FBXO36Q8NEA4 188 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 GRIN3AQ8TCU5 1115 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 FAM3CQ92520 227 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 EZH1Q92800 747 aaPredicted RBP14.64□□□□□ -0.07
NPC1-207ENST00000588867 HEPHQ9BQS7 1158 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 TDRD1Q9BXT4 1180 aaKnown RBP14.64□□□□□ -0.07
NPC1-207ENST00000588867 ATP13A3Q9H7F0 1226 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 DUSP12Q9UNI6 340 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 CHMP2BQ9UQN3 213 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 STARD13Q9Y3M8 1113 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 PCDHB9Q9Y5E1 797 aa14.64□□□□□ -0.07
NPC1-207ENST00000588867 F5P12259 2224 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 E7ESA3 106 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 AP3B1O00203 1094 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 ALOX15BO15296 676 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 EPOP01588 193 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 EPHX1P07099 455 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 SERPINA4P29622 427 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 MAGEA3P43357 314 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 KYNUQ16719 465 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 HNRNPA1L2Q32P51 320 aaKnown RBP14.63□□□□□ -0.07
NPC1-207ENST00000588867 TMEM196Q5HYL7 178 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 CAPN12Q6ZSI9 719 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 PALM2Q8IXS6 379 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 PLPP6Q8IY26 295 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 AGGF1Q8N302 714 aaeCLIP14.63□□□□□ -0.07
NPC1-207ENST00000588867 SIGLEC10Q96LC7 697 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 TMEM245Q9H330 911 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 CDC42EP4Q9H3Q1 356 aaKnown RBP14.63□□□□□ -0.07
NPC1-207ENST00000588867 SYBUQ9NX95 663 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 SORCS3Q9UPU3 1222 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 ARIH1Q9Y4X5 557 aaPredicted RBP14.63□□□□□ -0.07
NPC1-207ENST00000588867 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.63□□□□□ -0.07
NPC1-207ENST00000588867 EDDM13A0A1B0GTR0 161 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 NDST3O95803 873 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 CPP00450 1065 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 DRD1P21728 446 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 PRKCHP24723 683 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 NPY2RP49146 381 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 EPHB1P54762 984 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 ARMC12Q5T9G4 340 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 IGDCC3Q8IVU1 814 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 LPCAT1Q8NF37 534 aa14.63□□□□□ -0.07
NPC1-207ENST00000588867 TUBGCP5Q96RT8 1024 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms