RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 EBF2Q9HAK2 575 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 NT5MQ9NPB1 228 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 DKK3Q9UBP4 350 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 EIF2B4Q9UI10 523 aaKnown RBP20.44■□□□□ 0.86
DDX39A-207ENST00000588542 SLCO1B1Q9Y6L6 691 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TSPAN11A1L157 253 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 SPINT1O43278 529 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 CCNB1P14635 433 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 DPP6P42658 865 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 NR2C2P49116 596 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 MAXP61244 160 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 CCDC15Q0P6D6 951 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 PDK1Q15118 436 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 SF3A2Q15428 464 aaKnown RBP20.43■□□□□ 0.86
DDX39A-207ENST00000588542 TCEAL6Q6IPX3 200 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 FBXL19Q6PCT2 694 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 B4GALNT4Q76KP1 1039 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 CAMK1DQ8IU85 385 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 BBS5Q8N3I7 341 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 UBL4BQ8N7F7 174 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 TCEAL3Q969E4 200 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 ZNF641Q96N77 438 aaPredicted RBP20.43■□□□□ 0.86
DDX39A-207ENST00000588542 NUDCD1Q96RS6 583 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 OSBPL8Q9BZF1 889 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 PREBQ9HCU5 417 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 EFR3BQ9Y2G0 817 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 FADS3Q9Y5Q0 445 aa20.43■□□□□ 0.86
DDX39A-207ENST00000588542 PPP1R12AO14974 1030 aaPredicted RBP20.42■□□□□ 0.86
DDX39A-207ENST00000588542 LATO43561 262 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 AP1G1O43747 822 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 PTMAP06454 111 aaKnown RBP20.42■□□□□ 0.86
DDX39A-207ENST00000588542 TIMP2P16035 220 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 AP1S1P61966 158 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 ZNF211Q13398 564 aaPredicted RBP20.42■□□□□ 0.86
DDX39A-207ENST00000588542 ALG1LQ6GMV1 187 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 PRR23CQ6ZRP0 262 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 TRIM69Q86WT6 500 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 ZSWIM9Q86XI8 627 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 KIAA2013Q8IYS2 634 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 GPR161Q8N6U8 529 aaKnown RBP20.42■□□□□ 0.86
DDX39A-207ENST00000588542 HCAR2Q8TDS4 363 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 SNX19Q92543 992 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 IL12RB2Q99665 862 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 ATP13A3Q9H7F0 1226 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 NOD2Q9HC29 1040 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 RBM22Q9NW64 420 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■□□□□ 10.6
DDX39A-207ENST00000588542 AMACRQ9UHK6 382 aa20.42■□□□□ 0.86
DDX39A-207ENST00000588542 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.42■□□□□ 0.86
DDX39A-207ENST00000588542 KCNK1O00180 336 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 TRAFD1O14545 582 aaPredicted RBP20.41■□□□□ 0.86
DDX39A-207ENST00000588542 HLA-DQB2P05538 268 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 CD27P26842 260 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 MAPK8P45983 427 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 IFI35P80217 286 aaPredicted RBP20.41■□□□□ 0.86
DDX39A-207ENST00000588542 BCL2L1Q07817 233 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 AP1B1Q10567 949 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 ZBTB17Q13105 803 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 IHHQ14623 411 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 PRKD1Q15139 912 aaPredicted RBP20.41■□□□□ 0.86
DDX39A-207ENST00000588542 DUOXA1Q1HG43 343 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 FAM182AQ5T1J6 154 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 MEI1Q5TIA1 1274 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 NEK5Q6P3R8 708 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 SLC23A3Q6PIS1 610 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 BZW1Q7L1Q6 419 aaKnown RBP20.41■□□□□ 0.86
DDX39A-207ENST00000588542 ZCCHC9Q8N567 271 aaKnown RBP20.41■□□□□ 0.86
DDX39A-207ENST00000588542 P3H4Q92791 437 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 RAB7BQ96AH8 199 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 HAUS1Q96CS2 278 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 ECHDC3Q96DC8 303 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 BRD8Q9H0E9 1235 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 MIR1-1HGQ9H1L0 117 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 SCUBE2Q9NQ36 999 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 GGT7Q9UJ14 662 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 ZFR2Q9UPR6 939 aaKnown RBP20.41■□□□□ 0.86
DDX39A-207ENST00000588542 ATP8A1Q9Y2Q0 1164 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 TMEM131Q92545 1883 aa20.41■□□□□ 0.86
DDX39A-207ENST00000588542 A0A1W2PPC4 97 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 APOC4-APOC2K7ER74 178 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 AREL1O15033 823 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 RNGTTO60942 597 aaKnown RBP20.4■□□□□ 0.86
DDX39A-207ENST00000588542 JCHAINP01591 159 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 APOC2P02655 101 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 ITIH2P19823 946 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 SERPINA4P29622 427 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 IRX4P78413 519 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 TRIM61Q5EBN2 209 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 RALGPS1Q5JS13 557 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 LRRC73Q5JTD7 316 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 TTC7BQ86TV6 843 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 REXO1L1PQ8IX06 675 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 CNTD1Q8N815 330 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 CEP76Q8TAP6 659 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 POLR1EQ9GZS1 481 aaKnown RBP20.4■□□□□ 0.86
DDX39A-207ENST00000588542 CAPN10Q9HC96 672 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 RXFP3Q9NSD7 469 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 ITM2BQ9Y287 266 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 PCDHGC4Q9Y5F7 938 aa20.4■□□□□ 0.86
DDX39A-207ENST00000588542 A0A1B0GTW7 788 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms