RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 MMP13P45452 471 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 SCNN1BP51168 640 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 NAP1L1P55209 391 aaKnown RBP10.22□□□□□ -0.77
TPM4-207ENST00000588032 C21orf59P57076 290 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 PPP2CBP62714 309 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 PPP2CAP67775 309 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 BCL2L1Q07817 233 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 ELP6Q0PNE2 266 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 KIF5AQ12840 1032 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 GRIK2Q13002 908 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 TFDP2Q14188 446 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 ZNF284Q2VY69 593 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 SLC9A4Q6AI14 798 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 PARS2Q7L3T8 475 aaKnown RBP10.22□□□□□ -0.77
TPM4-207ENST00000588032 DGLUCYQ7Z3D6 616 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 KATNAL2Q8IYT4 538 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 MINDY1Q8N5J2 469 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 TEX26Q8N6G2 289 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 NETO2Q8NC67 525 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 CCDC112Q8NEF3 446 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 KIAA1524Q8TCG1 905 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 UBE2Q2Q8WVN8 375 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 RNF25Q96BH1 459 aaPredicted RBP10.22□□□□□ -0.77
TPM4-207ENST00000588032 HDAC11Q96DB2 347 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 EXOC2Q96KP1 924 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 NUDCD1Q96RS6 583 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 SLC17A9Q9BYT1 436 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 BRD8Q9H0E9 1235 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 EBF2Q9HAK2 575 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 AASDHPPTQ9NRN7 309 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 ANKRD6Q9Y2G4 727 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 REXO2Q9Y3B8 237 aaKnown RBP10.22□□□□□ -0.77
TPM4-207ENST00000588032 NYNRINQ9P2P1 1898 aaKnown RBP10.21□□□□□ -0.77
TPM4-207ENST00000588032 A0A1B0GVT2 93 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 A0A1W2PR77 199 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 RCCD1A6NED2 376 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 AREL1O15033 823 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 INSIG1O15503 277 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 MFSD11O43934 449 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 TNNT1P13805 278 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 CCNB1P14635 433 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 TIMP2P16035 220 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 CSRP1P21291 193 aaKnown RBP10.21□□□□□ -0.77
TPM4-207ENST00000588032 HNRNPA2B1P22626 353 aaKnown RBP10.21□□□□□ -0.77
TPM4-207ENST00000588032 NFKBIAP25963 317 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 MAT2AP31153 395 aaKnown RBP10.21□□□□□ -0.77
TPM4-207ENST00000588032 AKT2P31751 481 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 NR2C2P49116 596 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 COPS2P61201 443 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 SGCGQ13326 291 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 SUZ12Q15022 739 aaKnown RBP10.21□□□□□ -0.77
TPM4-207ENST00000588032 PDK1Q15118 436 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 TAZQ16635 292 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 UGP2Q16851 508 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 KIF19Q2TAC6 998 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 HLA-BQ31612 363 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 UAP1L1Q3KQV9 507 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 TMEM259Q4ZIN3 620 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 ERAP2Q6P179 960 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 CAMK1DQ8IU85 385 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 SYCE1Q8N0S2 351 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 PLD5Q8N7P1 536 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 CCNYQ8ND76 341 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 EXD1Q8NHP7 514 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 MAML1Q92585 1016 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 ECHDC3Q96DC8 303 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 RBM41Q96IZ5 413 aaKnown RBP10.21□□□□□ -0.77
TPM4-207ENST00000588032 SLC6A18Q96N87 628 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 LENG8Q96PV6 779 aaPredicted RBP10.21□□□□□ -0.77
TPM4-207ENST00000588032 MGME1Q9BQP7 344 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 C1QTNF2Q9BXJ5 285 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 LACRTQ9GZZ8 138 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 SLC32A1Q9H598 525 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 GAREM1Q9H706 876 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 ERVMER34-1Q9H9K5 563 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 FSCN3Q9NQT6 498 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 DTLQ9NZJ0 730 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 TFR2Q9UP52 801 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 ZFR2Q9UPR6 939 aaKnown RBP10.21□□□□□ -0.77
TPM4-207ENST00000588032 HYOU1Q9Y4L1 999 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 PCDHGB2Q9Y5G2 931 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 HS3ST3A1Q9Y663 406 aa10.21□□□□□ -0.77
TPM4-207ENST00000588032 CCDC66A2RUB6 948 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 DCDC2BA2VCK2 349 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 CFAP69A5D8W1 941 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 TLR4O00206 839 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 PPP1R12AO14974 1030 aaPredicted RBP10.2□□□□□ -0.78
TPM4-207ENST00000588032 MUSKO15146 869 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 SLC31A1O15431 190 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 YKT6O15498 198 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 ARHGAP6O43182 974 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 NRDCO43847 1150 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 SOCS5O75159 536 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 GJB3O75712 270 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 NEBLO76041 1014 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 PIGNO95427 931 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 PAK4O96013 591 aaPredicted RBP10.2□□□□□ -0.78
TPM4-207ENST00000588032 CR2P20023 1033 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms