RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 PDK3Q15120 406 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 HP1BP3Q5SSJ5 553 aaPredicted RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TMCO4Q5TGY1 634 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 ITPRIPL1Q6GPH6 555 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 ZNF449Q6P9G9 518 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 AAGABQ6PD74 315 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 LVRNQ6Q4G3 990 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CCDC81Q6ZN84 652 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 DENND5BQ6ZUT9 1274 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SRRM1Q8IYB3 904 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 COLGALT1Q8NBJ5 622 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CCNYQ8ND76 341 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 DTX3LQ8TDB6 740 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 PAFAH2Q99487 392 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 NAT9Q9BTE0 207 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 GPR62Q9BZJ7 368 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CRISPLD2Q9H0B8 497 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CATSPERBQ9H7T0 1116 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 NKIRAS1Q9NYS0 192 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SEPT10Q9P0V9 454 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 ZC3H7BQ9UGR2 993 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TBK1Q9UHD2 729 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TLR6Q9Y2C9 796 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 IFT52Q9Y366 437 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 MICAL3Q7RTP6 2002 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 FNDC1Q4ZHG4 1894 aaPredicted RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TCRBV9S1A1TA0A576 114 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 BUD23O43709 281 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 MAGEC1O60732 1142 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 FUCA1P04066 466 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ESRRAP11474 423 aaPredicted RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CPB1P15086 417 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 TAC1P20366 129 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 GARSP41250 739 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 C16orf72Q14CZ0 275 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 LRRC14Q15048 493 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CRY1Q16526 586 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 TRMT5Q32P41 509 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 USP41Q3LFD5 358 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 FAXCQ5TGI0 409 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 MANEALQ5VSG8 457 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 NXNQ6DKJ4 435 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CNKSR3Q6P9H4 555 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 POTEHQ6S545 545 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ZNF534Q76KX8 674 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 RASSF3Q86WH2 238 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 MCUR1Q96AQ8 359 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ALKBH8Q96BT7 664 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 TTPALQ9BTX7 342 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 EHD1Q9H4M9 534 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 C12orf10Q9HB07 376 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 IL20Q9NYY1 176 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 TMA7Q9Y2S6 64 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ARIH1Q9Y4X5 557 aaPredicted RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 IKBKGQ9Y6K9 419 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 WASF2Q9Y6W5 498 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 IQANK1A0A1B0GTG1 560 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 A0A1W2PQH9 124 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 MTMR11A4FU01 709 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 FAM47DPA6NHR8 397 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 HGSO14964 777 aaPredicted RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 AQP9O43315 295 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CBX6O95503 412 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 VCLP18206 1134 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 KRT15P19012 456 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 PRKCHP24723 683 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 YWHAQP27348 245 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 PCSK6P29122 969 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 GATMP50440 423 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CDK9P50750 372 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 NR1H2P55055 460 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 RPL10AP62906 217 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 IL9RQ01113 521 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CREB5Q02930 508 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 FAAP100Q0VG06 881 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 IFRD2Q12894 506 aaPredicted RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ZNF829Q3KNS6 432 aaPredicted RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 KCTD21Q4G0X4 260 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 C6orf163Q5TEZ5 329 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CYS1Q717R9 158 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 MMAAQ8IVH4 418 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ZNF567Q8N184 647 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 MARVELD2Q8N4S9 558 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 NPWQ8N729 165 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 LILRB4Q8NHJ6 448 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 SLC44A1Q8WWI5 657 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ATL1Q8WXF7 558 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 C1orf74Q96LT6 269 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CCDC138Q96M89 665 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 PPP1R2P1Q96PQ5 205 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 CDK5RAP1Q96SZ6 601 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 EBNA1BP2Q99848 306 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 NUF2Q9BZD4 464 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 TRABDQ9H4I3 376 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ZNF696Q9H7X3 374 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 TLR8Q9NR97 1041 aaKnown RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 KLHL8Q9P2G9 620 aaPredicted RBP9.75□□□□□ -0.85
LINC01539-201ENST00000587904 ZFP69BQ9UJL9 534 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms