RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 TRPV1Q8NER1 839 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 PTCD2Q8WV60 388 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 HEXDCQ8WVB3 486 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 SOCS4Q8WXH5 440 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 RNF34Q969K3 372 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 ASB9Q96DX5 294 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 ELMO2Q96JJ3 720 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 ZFRQ96KR1 1074 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 MRPS26Q9BYN8 205 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 OSBPL2Q9H1P3 480 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 POMKQ9H5K3 350 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 SLC2A6Q9UGQ3 507 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 A0A087X1B8 175 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 MEIS3P2A8K0S8 358 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 RNASEH2AO75792 299 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 ATP5F1P24539 256 aaPredicted RBP17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 CTGFP29279 349 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 PSMD8P48556 350 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 MAP7Q14244 749 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 C6orf52Q5T4I8 152 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 ARMC3Q5W041 872 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 CNSTQ6PJW8 725 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 CHSY3Q70JA7 882 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 IFNL1Q8IU54 200 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 GALNT4Q8N4A0 578 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 METTL25Q8N6Q8 603 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 C2CD4AQ8NCU7 369 aaPredicted RBP17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 FAM156AQ8NDB6 213 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 SGF29Q96ES7 293 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 FICDQ9BVA6 458 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 GLOD4Q9HC38 313 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 ADA2Q9NZK5 511 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 APPL1Q9UKG1 709 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 CNOT11Q9UKZ1 510 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 NEU3Q9UQ49 428 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 TCAF1Q9Y4C2 921 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 PCDHGA7Q9Y5G6 932 aa17.02■□□□□ 0.31
PRKCSH-205ENST00000587327 KCNU1A8MYU2 1149 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 TNPO2O14787 897 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 HNRNPLP14866 589 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 ADRA1AP35348 466 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 PSME3P61289 254 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 CDKL1Q00532 357 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 POU4F1Q01851 419 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 TRIM25Q14258 630 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 ISLR2Q6UXK2 745 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 RBM44Q6ZP01 1051 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 ARHGAP12Q8IWW6 846 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 ATPAF2Q8N5M1 289 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 SPPL2BQ8TCT7 592 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 DTNBP1Q96EV8 351 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 SMARCD1Q96GM5 515 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 IL12RB2Q99665 862 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 TREX1Q9NSU2 369 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 MRGBPQ9NV56 204 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 GTSE1Q9NYZ3 720 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 SCN10AQ9Y5Y9 1956 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 MAFKO60675 156 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 AKR1A1P14550 325 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 CD151P48509 253 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 KPNA2P52292 529 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 MRPS6P82932 125 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 CREB5Q02930 508 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 SULT2A1Q06520 285 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 STX5Q13190 355 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 LAMB3Q13751 1172 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 NADK2Q4G0N4 442 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 ZNF470Q6ECI4 717 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 TAF2Q6P1X5 1199 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 GK5Q6ZS86 529 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 RHOBTB2Q9BYZ6 727 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 MRM3Q9HC36 420 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 CSNK1G1Q9HCP0 422 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 ENTPD7Q9NQZ7 604 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 PTTG2Q9NZH5 202 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 SUCOQ9UBS9 1254 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 CDH9Q9ULB4 789 aa17.01■□□□□ 0.31
PRKCSH-205ENST00000587327 FNDC1Q4ZHG4 1894 aaPredicted RBP17■□□□□ 0.31
PRKCSH-205ENST00000587327 NEMP2A6NFY4 417 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 FAM58BPP0C7Q3 252 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 PAMP19021 973 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 SLC12A2P55011 1212 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 USP41Q3LFD5 358 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 IL23RQ5VWK5 629 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 IYDQ6PHW0 289 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 PCDH20Q8N6Y1 951 aaKnown RBP17■□□□□ 0.31
PRKCSH-205ENST00000587327 IRGQQ8WZA9 623 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 PRPF18Q99633 342 aaKnown RBP17■□□□□ 0.31
PRKCSH-205ENST00000587327 SIK2Q9H0K1 926 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 MRPL40Q9NQ50 206 aaKnown RBP17■□□□□ 0.31
PRKCSH-205ENST00000587327 CHST12Q9NRB3 414 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 IGSF5Q9NSI5 407 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 SLC38A7Q9NVC3 462 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 FBXO5Q9UKT4 447 aa17■□□□□ 0.31
PRKCSH-205ENST00000587327 E7ENX8 843 aa16.99■□□□□ 0.31
PRKCSH-205ENST00000587327 MATN3O15232 486 aa16.99■□□□□ 0.31
PRKCSH-205ENST00000587327 SPATA31D3P0C874 917 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms