RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 MRPS17Q9Y2R5 130 aaKnown RBP15.1■□□□□ 0.01
NFIX-208ENST00000587260 INSIG1O15503 277 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 CHRNB1P11230 501 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 HNRNPLP14866 589 aaKnown RBP eCLIP15.09■□□□□ 0.01
NFIX-208ENST00000587260 GKP32189 559 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 ARL4CP56559 192 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 FBXO43Q4G163 708 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 SPDYCQ5MJ68 293 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 SYCP2LQ5T4T6 812 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 PKN3Q6P5Z2 889 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 LRRC8BQ6P9F7 803 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 KDELC1Q6UW63 502 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 ZNF534Q76KX8 674 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 TMC3Q7Z5M5 1100 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 CAND1Q86VP6 1230 aaKnown RBP15.09■□□□□ 0.01
NFIX-208ENST00000587260 PDIK1LQ8N165 341 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 IL17RCQ8NAC3 791 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 TXNDC5Q8NBS9 432 aaKnown RBP15.09■□□□□ 0.01
NFIX-208ENST00000587260 OR2AP1Q8NGE2 309 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 SPATA22Q8NHS9 363 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 SERPINB12Q96P63 405 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 NUDCD1Q96RS6 583 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 RBM15Q96T37 977 aaKnown RBP eCLIP15.09■□□□□ 0.01
NFIX-208ENST00000587260 SCUBE2Q9NQ36 999 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 UBP1Q9NZI7 540 aa15.09■□□□□ 0.01
NFIX-208ENST00000587260 EVLQ9UI08 416 aaPredicted RBP15.09■□□□□ 0.01
NFIX-208ENST00000587260 EDDM13A0A1B0GTR0 161 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 FAM170BA6NMN3 283 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 AP3B1O00203 1094 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 DCXO43602 365 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 SIN3BO75182 1162 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 MT-CYBP00156 380 aaPredicted RBP15.08■□□□□ 0.01
NFIX-208ENST00000587260 GSRP00390 522 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 ADRA1AP35348 466 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 CD86P42081 329 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 RECQLP46063 649 aaPredicted RBP15.08■□□□□ 0.01
NFIX-208ENST00000587260 LMAN1P49257 510 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 CCNHP51946 323 aaPredicted RBP15.08■□□□□ 0.01
NFIX-208ENST00000587260 SNRPD1P62314 119 aaKnown RBP15.08■□□□□ 0.01
NFIX-208ENST00000587260 SKOR1P84550 965 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 DHX9Q08211 1270 aaKnown RBP15.08■□□□□ 0.01
NFIX-208ENST00000587260 SIGLEC14Q08ET2 396 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 LRRC32Q14392 662 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 IHHQ14623 411 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 HIF1AQ16665 826 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 HNRNPA1L2Q32P51 320 aaKnown RBP15.08■□□□□ 0.01
NFIX-208ENST00000587260 NAPEPLDQ6IQ20 393 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 DPY19L3Q6ZPD9 716 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 CENPUQ71F23 418 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 LINC00523Q86TU6 105 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 PLPP6Q8IY26 295 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 ZNF687Q8N1G0 1237 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 KDM1BQ8NB78 822 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 CHST14Q8NCH0 376 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 FLCNQ8NFG4 579 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 GRIN3AQ8TCU5 1115 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 PTPRN2Q92932 1015 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 MFSD1Q9H3U5 465 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 ZDHHC6Q9H6R6 413 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 LMAN1LQ9HAT1 526 aa15.08■□□□□ 0.01
NFIX-208ENST00000587260 GOLGA8MH3BSY2 632 aa15.07■□□□□ 0
NFIX-208ENST00000587260 ALOX15BO15296 676 aa15.07■□□□□ 0
NFIX-208ENST00000587260 ADAM23O75077 832 aa15.07■□□□□ 0
NFIX-208ENST00000587260 PDGFBP01127 241 aaPredicted RBP15.07■□□□□ 0
NFIX-208ENST00000587260 EPOP01588 193 aa15.07■□□□□ 0
NFIX-208ENST00000587260 HOXB2P14652 356 aa15.07■□□□□ 0
NFIX-208ENST00000587260 NTSR1P30989 418 aa15.07■□□□□ 0
NFIX-208ENST00000587260 MRPS21P82921 87 aaKnown RBP15.07■□□□□ 0
NFIX-208ENST00000587260 PCSK7Q16549 785 aa15.07■□□□□ 0
NFIX-208ENST00000587260 CARD16Q5EG05 197 aa15.07■□□□□ 0
NFIX-208ENST00000587260 FNBP1LQ5T0N5 605 aa15.07■□□□□ 0
NFIX-208ENST00000587260 RANBP10Q6VN20 620 aa15.07■□□□□ 0
NFIX-208ENST00000587260 TRMT11Q7Z4G4 463 aaKnown RBP15.07■□□□□ 0
NFIX-208ENST00000587260 CACUL1Q86Y37 369 aa15.07■□□□□ 0
NFIX-208ENST00000587260 PJA1Q8NG27 643 aa15.07■□□□□ 0
NFIX-208ENST00000587260 OR2A12Q8NGT7 310 aa15.07■□□□□ 0
NFIX-208ENST00000587260 EDAQ92838 391 aa15.07■□□□□ 0
NFIX-208ENST00000587260 LRRC39Q96DD0 335 aa15.07■□□□□ 0
NFIX-208ENST00000587260 MRGPRX2Q96LB1 330 aa15.07■□□□□ 0
NFIX-208ENST00000587260 NSMCE3Q96MG7 304 aa15.07■□□□□ 0
NFIX-208ENST00000587260 PWWP2AQ96N64 755 aa15.07■□□□□ 0
NFIX-208ENST00000587260 COL25A1Q9BXS0 654 aaPredicted RBP15.07■□□□□ 0
NFIX-208ENST00000587260 ARNT2Q9HBZ2 717 aa15.07■□□□□ 0
NFIX-208ENST00000587260 NOD2Q9HC29 1040 aa15.07■□□□□ 0
NFIX-208ENST00000587260 CASS4Q9NQ75 786 aa15.07■□□□□ 0
NFIX-208ENST00000587260 POLR3BQ9NW08 1133 aaPredicted RBP15.07■□□□□ 0
NFIX-208ENST00000587260 LOC285095A0A1B0GVY8 99 aa15.07■□□□□ 0
NFIX-208ENST00000587260 DLL1O00548 723 aa15.07■□□□□ 0
NFIX-208ENST00000587260 NPC1O15118 1278 aa15.07■□□□□ 0
NFIX-208ENST00000587260 PIGNO95427 931 aa15.07■□□□□ 0
NFIX-208ENST00000587260 SERPINF2P08697 491 aa15.07■□□□□ 0
NFIX-208ENST00000587260 GRIA1P42261 906 aa15.07■□□□□ 0
NFIX-208ENST00000587260 MAPK8P45983 427 aa15.07■□□□□ 0
NFIX-208ENST00000587260 WNT3AP56704 352 aa15.07■□□□□ 0
NFIX-208ENST00000587260 AP1S1P61966 158 aa15.07■□□□□ 0
NFIX-208ENST00000587260 ENPP2Q13822 863 aa15.07■□□□□ 0
NFIX-208ENST00000587260 E2F5Q15329 346 aa15.07■□□□□ 0
NFIX-208ENST00000587260 C9orf64Q5T6V5 341 aa15.07■□□□□ 0
NFIX-208ENST00000587260 SDE2Q6IQ49 451 aa15.07■□□□□ 0
NFIX-208ENST00000587260 NCEH1Q6PIU2 408 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms