RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SPINT1O43278 529 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 TIMP2P16035 220 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 AMPD1P23109 780 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 SSR1P43307 286 aaKnown RBP17.9■□□□□ 0.46
TPM4-206ENST00000587201 TXNRD3NBQ6F5E7 133 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 KYAT3Q6YP21 454 aaKnown RBP17.9■□□□□ 0.46
TPM4-206ENST00000587201 POLNQ7Z5Q5 900 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 DCP2Q8IU60 420 aaKnown RBP17.9■□□□□ 0.46
TPM4-206ENST00000587201 OR8K1Q8NGG5 319 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 ZNF564Q8TBZ8 553 aaPredicted RBP17.9■□□□□ 0.46
TPM4-206ENST00000587201 CXorf40AQ8TE69 158 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 LENG8Q96PV6 779 aaPredicted RBP17.9■□□□□ 0.46
TPM4-206ENST00000587201 CINPQ9BW66 212 aaPredicted RBP17.9■□□□□ 0.46
TPM4-206ENST00000587201 DEF6Q9H4E7 631 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 SUV39H2Q9H5I1 410 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 KLHL11Q9NVR0 708 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 ZNHIT6Q9NWK9 470 aaKnown RBP17.9■□□□□ 0.46
TPM4-206ENST00000587201 IPO11Q9UI26 975 aaKnown RBP17.9■□□□□ 0.46
TPM4-206ENST00000587201 CEP295Q9C0D2 2601 aa17.9■□□□□ 0.46
TPM4-206ENST00000587201 POM121BA6NF01 834 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 AREL1O15033 823 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 MMP20O60882 483 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 DKK1O94907 266 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 TPM1P09493 284 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 ITIH2P19823 946 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 SLC25A11Q02978 314 aaKnown RBP17.89■□□□□ 0.45
TPM4-206ENST00000587201 IL10RBQ08334 325 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 RFTN1Q14699 578 aaPredicted RBP17.89■□□□□ 0.45
TPM4-206ENST00000587201 HADHQ16836 314 aaKnown RBP17.89■□□□□ 0.45
TPM4-206ENST00000587201 TSR1Q2NL82 804 aaKnown RBP17.89■□□□□ 0.45
TPM4-206ENST00000587201 CFAP58Q5T655 872 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 TMCO3Q6UWJ1 677 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 KANSL1Q7Z3B3 1105 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 TP53INP2Q8IXH6 220 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 SLC22A18ASQ8N1D0 253 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 TSEN2Q8NCE0 465 aaKnown RBP17.89■□□□□ 0.45
TPM4-206ENST00000587201 HCAR2Q8TDS4 363 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 TEKT4Q8WW24 435 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 ASB12Q8WXK4 309 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 CSPG4P5Q96PW8 444 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 KLF6Q99612 283 aaPredicted RBP17.89■□□□□ 0.45
TPM4-206ENST00000587201 PCDH18Q9HCL0 1135 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 ETNK2Q9NVF9 386 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 CTTNBP2NLQ9P2B4 639 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 NENFQ9UMX5 172 aa17.89■□□□□ 0.45
TPM4-206ENST00000587201 MAP1BP46821 2468 aaKnown RBP17.89■□□□□ 0.45
TPM4-206ENST00000587201 TM7SF2O76062 418 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 H2AFZP0C0S5 128 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 RABIFP47224 123 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 RGRP47804 291 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 CSNK1DP48730 415 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 SUOXP51687 545 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 ELP6Q0PNE2 266 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 DNAJC3Q13217 504 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 KRT81Q14533 505 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 SLC18A3Q16572 532 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 H2AFVQ71UI9 128 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 SRLQ86TD4 932 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 VSTM4Q8IW00 320 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 DENND6BQ8NEG7 585 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 CTNNBL1Q8WYA6 563 aaPredicted RBP17.88■□□□□ 0.45
TPM4-206ENST00000587201 ZNF641Q96N77 438 aaPredicted RBP17.88■□□□□ 0.45
TPM4-206ENST00000587201 TUBGCP5Q96RT8 1024 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 DNAJC7Q99615 494 aa17.88■□□□□ 0.45
TPM4-206ENST00000587201 WRAP53Q9BUR4 548 aaKnown RBP17.88■□□□□ 0.45
TPM4-206ENST00000587201 TMEM8BA6NDV4 472 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 BUB1BO60566 1050 aaPredicted RBP17.87■□□□□ 0.45
TPM4-206ENST00000587201 DGKAP23743 735 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 SERPINA4P29622 427 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 SERPINB6P35237 376 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 CDH6P55285 790 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 PDE1CQ14123 709 aaPredicted RBP17.87■□□□□ 0.45
TPM4-206ENST00000587201 LBRQ14739 615 aaKnown RBP17.87■□□□□ 0.45
TPM4-206ENST00000587201 UGP2Q16851 508 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 HS1BP3Q53T59 392 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 ZNF542PQ5EBM4 170 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 ERAP2Q6P179 960 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 BRAT1Q6PJG6 821 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 CCNI2Q6ZMN8 369 aaPredicted RBP17.87■□□□□ 0.45
TPM4-206ENST00000587201 TMPRSS7Q7RTY8 843 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 CAMK1DQ8IU85 385 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 PAF1Q8N7H5 531 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 IFT43Q96FT9 208 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 C1QTNF7Q9BXJ2 289 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 PACSIN1Q9BY11 444 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 ATP13A3Q9H7F0 1226 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 DNAJC28Q9NX36 388 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 UVRAGQ9P2Y5 699 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 SEPT3Q9UH03 358 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 EPG5Q9HCE0 2579 aa17.87■□□□□ 0.45
TPM4-206ENST00000587201 COL5A1P20908 1838 aaPredicted RBP17.86■□□□□ 0.45
TPM4-206ENST00000587201 SSU72P8A0A1W2PR75 194 aa17.86■□□□□ 0.45
TPM4-206ENST00000587201 TSPAN11A1L157 253 aa17.86■□□□□ 0.45
TPM4-206ENST00000587201 AKR1B10O60218 316 aa17.86■□□□□ 0.45
TPM4-206ENST00000587201 GJC1P36383 396 aa17.86■□□□□ 0.45
TPM4-206ENST00000587201 SCNN1BP51168 640 aa17.86■□□□□ 0.45
TPM4-206ENST00000587201 RENBPP51606 427 aa17.86■□□□□ 0.45
TPM4-206ENST00000587201 BCL2L1Q07817 233 aa17.86■□□□□ 0.45
TPM4-206ENST00000587201 NSUN2Q08J23 767 aaKnown RBP eCLIP17.86■□□□□ 0.45
TPM4-206ENST00000587201 TMEM52BQ4KMG9 183 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms