RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 CDH17Q12864 832 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 USP4Q13107 963 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 TMEM135Q86UB9 458 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 TTC8Q8TAM2 541 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 OSCP1Q8WVF1 389 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 KLF16Q9BXK1 252 aaPredicted RBP18.74■□□□□ 0.59
RETREG3-205ENST00000586870 IL22Q9GZX6 179 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 KDM4CQ9H3R0 1056 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 ARHGEF3Q9NR81 526 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 TBC1D14Q9P2M4 693 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 SLC17A7Q9P2U7 560 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 STARD13Q9Y3M8 1113 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 WNT6Q9Y6F9 365 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 RPS6KL1Q9Y6S9 549 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 NUP205Q92621 2012 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 FAM237BA0A1B0GVD1 139 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 E2F8A0AVK6 867 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 USP12O75317 370 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 ETV4P43268 484 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 ZXDBP98169 803 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 ZKSCAN8Q15776 578 aaPredicted RBP18.74■□□□□ 0.59
RETREG3-205ENST00000586870 LACTB2Q53H82 288 aaPredicted RBP18.74■□□□□ 0.59
RETREG3-205ENST00000586870 TRIM68Q6AZZ1 485 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 PACS1Q6VY07 963 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 CHSY1Q86X52 802 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.74■□□□□ 0.59
RETREG3-205ENST00000586870 CCT6BQ92526 530 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 ZNF75CPQ92670 426 aaPredicted RBP18.74■□□□□ 0.59
RETREG3-205ENST00000586870 PBXIP1Q96AQ6 731 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 CERS2Q96G23 380 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 IQCGQ9H095 443 aaKnown RBP18.74■□□□□ 0.59
RETREG3-205ENST00000586870 EBF3Q9H4W6 596 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 NOL6Q9H6R4 1146 aaKnown RBP18.74■□□□□ 0.59
RETREG3-205ENST00000586870 TRPV5Q9NQA5 729 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 HEBP1Q9NRV9 189 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 RBM22Q9NW64 420 aaKnown RBP eCLIP18.74■□□□□ 0.594e-8■■■■□ 23.7
RETREG3-205ENST00000586870 IPO11Q9UI26 975 aaKnown RBP18.74■□□□□ 0.59
RETREG3-205ENST00000586870 ARL2BPQ9Y2Y0 163 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 SHROOM3Q8TF72 1996 aa18.74■□□□□ 0.59
RETREG3-205ENST00000586870 DOCK8Q8NF50 2099 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 ANKRD65E5RJM6 399 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 SCAMP3O14828 347 aaKnown RBP18.73■□□□□ 0.59
RETREG3-205ENST00000586870 OLIG2Q13516 323 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 RUNX3Q13761 415 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 MLF2Q15773 248 aaPredicted RBP18.73■□□□□ 0.59
RETREG3-205ENST00000586870 ITPRIPL2Q3MIP1 535 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 FBXL22Q6P050 247 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 ACMSDQ8TDX5 336 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 ATP2A3Q93084 1043 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 FAM83CQ9BQN1 747 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 ACTR5Q9H9F9 607 aaPredicted RBP18.73■□□□□ 0.59
RETREG3-205ENST00000586870 GTSE1Q9NYZ3 720 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 SOX13Q9UN79 622 aa18.73■□□□□ 0.59
RETREG3-205ENST00000586870 HMX2A2RU54 273 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 FAM86C2PA6NEL3 165 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 EDF1O60869 148 aaKnown RBP18.72■□□□□ 0.59
RETREG3-205ENST00000586870 NEBLO76041 1014 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 PRKCQQ04759 706 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 TNK2Q07912 1038 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 BMPR2Q13873 1038 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 HNRNPDQ14103 355 aaKnown RBP18.72■□□□□ 0.59
RETREG3-205ENST00000586870 ANKRD20A4Q4UJ75 823 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 TMEM31Q5JXX7 168 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 RAP1GAP2Q684P5 730 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 RASSF3Q86WH2 238 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 CCDC117Q8IWD4 279 aaPredicted RBP18.72■□□□□ 0.59
RETREG3-205ENST00000586870 UNC5BQ8IZJ1 945 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 CPA6Q8N4T0 437 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 KIAA1958Q8N8K9 716 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 FLCNQ8NFG4 579 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 RIN3Q8TB24 985 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 ZNF669Q96BR6 464 aaPredicted RBP18.72■□□□□ 0.59
RETREG3-205ENST00000586870 ZFRQ96KR1 1074 aaKnown RBP18.72■□□□□ 0.59
RETREG3-205ENST00000586870 FCRL3Q96P31 734 aaPredicted RBP18.72■□□□□ 0.59
RETREG3-205ENST00000586870 SRPK1Q96SB4 655 aaKnown RBP18.72■□□□□ 0.59
RETREG3-205ENST00000586870 TBL1YQ9BQ87 522 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 LINC00597Q9H2U6 94 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 ZFATQ9P243 1243 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 PHTF1Q9UMS5 762 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 PIAS3Q9Y6X2 628 aa18.72■□□□□ 0.59
RETREG3-205ENST00000586870 NFATC1O95644 943 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 GP5P40197 560 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 RENBPP51606 427 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 ALFQ53S48 1182 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 CERCAMQ5T4B2 595 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 GRTP1Q5TC63 336 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 MROH9Q5TGP6 573 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 CGB2Q6NT52 195 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 TPRG1Q6ZUI0 275 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 FAM47EQ6ZV65 393 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 IGSF8Q969P0 613 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 ASIC4Q96FT7 647 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 FAM111AQ96PZ2 611 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 CPNE1Q99829 537 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 RETREG1Q9H6L5 497 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 C8orf33Q9H7E9 229 aaPredicted RBP18.71■□□□□ 0.59
RETREG3-205ENST00000586870 TXNDC16Q9P2K2 825 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 PLLPQ9Y342 182 aa18.71■□□□□ 0.59
RETREG3-205ENST00000586870 ZCWPW2A0A1B0GU75 182 aa18.71■□□□□ 0.58
RETREG3-205ENST00000586870 MAN2B1O00754 1011 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms