RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PDFQ9HBH1 243 aa10.52□□□□□ -0.73
LIG3-203ENST00000585370 PLAC1Q9HBJ0 212 aa10.52□□□□□ -0.73
LIG3-203ENST00000585370 ATP13A1Q9HD20 1204 aa10.52□□□□□ -0.73
LIG3-203ENST00000585370 TXNDC16Q9P2K2 825 aa10.52□□□□□ -0.73
LIG3-203ENST00000585370 FBXL21Q9UKT6 434 aa10.52□□□□□ -0.73
LIG3-203ENST00000585370 ARHGAP26Q9UNA1 814 aa10.52□□□□□ -0.73
LIG3-203ENST00000585370 MYO18AQ92614 2054 aaKnown RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 KRBA1A5PL33 1030 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 F5H423 210 aaPredicted RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 H0Y626 953 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 ATP9BO43861 1147 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 GREM1O60565 184 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 TBL1XO60907 577 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 LUC7L3O95232 432 aaKnown RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 PAPSS2O95340 614 aaPredicted RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 FAM107AO95990 144 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 MT-CYBP00156 380 aaPredicted RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 CYBBP04839 570 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 SERPINF2P08697 491 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 LAMP2P13473 410 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 TCF3P15923 654 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 HLA-DPA1P20036 260 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 ACVRL1P37023 503 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 POLD2P49005 469 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 SLC20A2Q08357 652 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
LIG3-203ENST00000585370 NIPAL4Q0D2K0 466 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 MTM1Q13496 603 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 SLC12A1Q13621 1099 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 SEPT7Q16181 437 aaKnown RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 PDPK2PQ6A1A2 396 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 DENND5AQ6IQ26 1287 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 CIR1Q86X95 450 aaPredicted RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 ST13P5Q8NFI4 369 aaPredicted RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 IPMKQ8NFU5 416 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 SPATA22Q8NHS9 363 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 DENND1AQ8TEH3 1009 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 MZB1Q8WU39 189 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 PEX13Q92968 403 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 MRRFQ96E11 262 aaKnown RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 CHMP6Q96FZ7 201 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 CERS2Q96G23 380 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 FEM1CQ96JP0 617 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 MRGPRX2Q96LB1 330 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 PRICKLE1Q96MT3 831 aaPredicted RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 PSKH2Q96QS6 385 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 SPON2Q9BUD6 331 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 PIDD1Q9HB75 910 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 PPANQ9NQ55 473 aaKnown RBP10.51□□□□□ -0.73
LIG3-203ENST00000585370 SMPD4Q9NXE4 827 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 UBP1Q9NZI7 540 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 ZFATQ9P243 1243 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 WNT16Q9UBV4 365 aa10.51□□□□□ -0.73
LIG3-203ENST00000585370 ZCWPW2A0A1B0GU75 182 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 LOC285095A0A1B0GVY8 99 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 A0A1W2PPM1 405 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 A0A1W2PRU2 124 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 HEATR9A2RTY3 570 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 PRR23AA6NEV1 266 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CXorf49A8MYA2 514 aaPredicted RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 TRIM49D1C9J1S8 452 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 ANHXE9PGG2 379 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 NDUFAB1O14561 156 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CCL16O15467 120 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 TYROBPO43914 113 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 TSPAN3O60637 253 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 USP12O75317 370 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 PMPCBO75439 489 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 KRT4P19013 534 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CA4P22748 312 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 HOXD9P28356 352 aaPredicted RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 SPRP35270 261 aaPredicted RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 AVPR1AP37288 418 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 GP5P40197 560 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CD86P42081 329 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CCT5P48643 541 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 SERPINH1P50454 418 aaKnown RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 CSE1LP55060 971 aaKnown RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 CYP4F8P98187 520 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 DMTNQ08495 405 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 EFTUD2Q15029 972 aaKnown RBP eCLIP10.5□□□□□ -0.735e-6■■■■□ 20.8
LIG3-203ENST00000585370 UGP2Q16851 508 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CERCAMQ5T4B2 595 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 STXBP5Q5T5C0 1151 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 FYB2Q5VWT5 728 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 RNF219Q5W0B1 726 aaPredicted RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 TTC19Q6DKK2 380 aaPredicted RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 TRMT10BQ6PF06 316 aaKnown RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 RASSF3Q86WH2 238 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 SPATS2Q86XZ4 545 aaKnown RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 LMNTD2Q8IXW0 634 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CMTM8Q8IZV2 173 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 BANPQ8N9N5 519 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 DTWD2Q8NBA8 298 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 OR7D4Q8NG98 312 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 ARRDC2Q8TBH0 407 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CALML6Q8TD86 181 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CKAP2Q8WWK9 683 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 NXPE3Q969Y0 559 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 ACDQ96AP0 544 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms