RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MRPS31Q92665 395 aaKnown RBP10.38□□□□□ -0.75
RFFL-212ENST00000584655 USP13Q92995 863 aaPredicted RBP10.38□□□□□ -0.75
RFFL-212ENST00000584655 ASIC4Q96FT7 647 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 APOPT1Q96IL0 206 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 MAGEB18Q96M61 343 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 TTC1Q99614 292 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 ZDHHC6Q9H6R6 413 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 FAM95CA0A1B0GW59 222 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 RFPL1O75677 317 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 EPCAMP16422 314 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 CDK7P50613 346 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 ZXDBP98169 803 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 FIBCD1Q8N539 461 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 BANPQ8N9N5 519 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 CATSPER2Q96P56 530 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 FAM167BQ9BTA0 163 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 SCUBE2Q9NQ36 999 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 ABCB8Q9NUT2 735 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 ARL8BQ9NVJ2 186 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 SPG21Q9NZD8 308 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.38□□□□□ -0.753e-7■■■■□ 22.4
RFFL-212ENST00000584655 PCDHB12Q9Y5F1 795 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 B2RBV5 119 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 TGM5O43548 720 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 VNN2O95498 520 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 RALBP11234 206 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 CPA3P15088 417 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 CES1P23141 567 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 CSKP41240 450 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 RENBPP51606 427 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 SLC25A3Q00325 362 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 LBRQ14739 615 aaKnown RBP10.38□□□□□ -0.75
RFFL-212ENST00000584655 LONP2Q86WA8 852 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 TDRD5Q8NAT2 981 aaKnown RBP10.38□□□□□ -0.75
RFFL-212ENST00000584655 GBA3Q9H227 469 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 CXorf56Q9H5V9 222 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 NOL6Q9H6R4 1146 aaKnown RBP10.38□□□□□ -0.75
RFFL-212ENST00000584655 FBXO5Q9UKT4 447 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 AGO1Q9UL18 857 aaKnown RBP10.38□□□□□ -0.75
RFFL-212ENST00000584655 ZNF840PA6NDX5 716 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 HLA-EP13747 358 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 SPRP35270 261 aaPredicted RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 GP5P40197 560 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 COG7P83436 770 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 ENPEPQ07075 957 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 PPIDQ08752 370 aaKnown RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 GLT6D1Q7Z4J2 308 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 DDIASQ8IXT1 998 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 PGBD5Q8N414 524 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 SREK1Q8WXA9 508 aaKnown RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 MTFMTQ96DP5 389 aaKnown RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 SGSM3Q96HU1 749 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 BTN2A3PQ96KV6 586 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 KLC4Q9NSK0 619 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 SLC24A2Q9UI40 661 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 BTRCQ9Y297 605 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 GYG2O15488 501 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 OAZ2O95190 189 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 PTPN7P35236 360 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 GNA12Q03113 381 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 IRF5Q13568 498 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 SIRPB2Q5JXA9 342 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 MFSD5Q6N075 450 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 IFNEQ86WN2 208 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 ZNF461Q8TAF7 563 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 ATP6V1E2Q96A05 226 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 OLFM3Q96PB7 478 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 MAF1Q9H063 256 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 UBA2Q9UBT2 640 aaPredicted RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 SMG5Q9UPR3 1016 aaKnown RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 CFAP54Q96N23 3096 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 ARHGEF37A1IGU5 675 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 ACSL4O60488 711 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 RHOBTB1O94844 696 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 UGT2B4P06133 528 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 SERPINF2P08697 491 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 SERPINH1P50454 418 aaKnown RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 BTKQ06187 659 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 TNK2Q07912 1038 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 PFKFB4Q16877 469 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 SLC44A4Q53GD3 710 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 TCHHL1Q5QJ38 904 aaPredicted RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 LRRC8BQ6P9F7 803 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 MARK2Q7KZI7 788 aaKnown RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 ZNF781Q8N8C0 355 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 FAM156AQ8NDB6 213 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 POF1BQ8WVV4 589 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 C11orf84Q9BUA3 381 aaPredicted RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 BBS2Q9BXC9 721 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 SMOC2Q9H3U7 446 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 LATS2Q9NRM7 1088 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 FKBPLQ9UIM3 349 aa10.37□□□□□ -0.75
RFFL-212ENST00000584655 EP300Q09472 2414 aaPredicted RBP10.37□□□□□ -0.75
RFFL-212ENST00000584655 TYW5A2RUC4 315 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 PRR5-ARHGAP8B1AHC4 643 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 E5RI56 91 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 STX7O15400 261 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 STC2O76061 302 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 ARHGEF15O94989 841 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 HOXC8P31273 242 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms