RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ATP6V1B1P15313 513 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 GJA1P17302 382 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 HDCP19113 662 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 PAX7P23759 505 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 CTGFP29279 349 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 BTKQ06187 659 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 HEXDCQ8WVB3 486 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 SEPT8Q92599 483 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 MID1IP1Q9NPA3 183 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 GIMAP2Q9UG22 337 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 TLL2Q9Y6L7 1015 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 SLC30A1Q9Y6M5 507 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 CNTRLQ7Z7A1 2325 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 HMX2A2RU54 273 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 NR5A2O00482 541 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 GABRDO14764 452 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 PEX11AO75192 247 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 TBX10O75333 385 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 SIX3O95343 332 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 INHAP05111 366 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 CYP2C18P33260 490 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 ATP5C1P36542 298 aaKnown RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 IL1RL1Q01638 556 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 PITRM1Q5JRX3 1037 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 MRNIPQ6NTE8 343 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 GLT6D1Q7Z4J2 308 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 ZNF598Q86UK7 904 aaKnown RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 CALML6Q8TD86 181 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 TRPC4APQ8TEL6 797 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 C7orf26Q96N11 449 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 MRPL1Q9BYD6 325 aaKnown RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 NMRK1Q9NWW6 199 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 TRPM5Q9NZQ8 1165 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 KANSL3Q9P2N6 904 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 RNF112Q9ULX5 631 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 NUMBLQ9Y6R0 609 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 MATN3O15232 486 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 PEX1O43933 1283 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 HNRNPCL1O60812 293 aaKnown RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 RAG1P15918 1043 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 GM2AP17900 193 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 SLC34A1Q06495 639 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 DEFB115Q30KQ5 88 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 LRRC73Q5JTD7 316 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 C6orf10Q5SRN2 563 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 LCA5Q86VQ0 697 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 CACUL1Q86Y37 369 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 LZTR1Q8N653 840 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 SLC2A13Q96QE2 648 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 SLC9A7Q96T83 725 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 PCDHB9Q9Y5E1 797 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 KIF3CO14782 793 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 SERPINA6P08185 405 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 TPBGLP0DKB5 382 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 COX4I1P13073 169 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 RHOAP61586 193 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 FUT10Q6P4F1 479 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 GK5Q6ZS86 529 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 ARCQ7LC44 396 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 OR4K2Q8NGD2 314 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 CAPNS2Q96L46 248 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 OLFM3Q96PB7 478 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 GCNAQ96QF7 691 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 POLR1EQ9GZS1 481 aaKnown RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 MRPL46Q9H2W6 279 aaKnown RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 EPS15L1Q9UBC2 864 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 SLC7A8Q9UHI5 535 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 BTN3A1O00481 513 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 FGF10O15520 208 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 BAIAP3O94812 1187 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 TOMM70O94826 608 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 FGF3P11487 239 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 NELFEP18615 380 aaKnown RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 PTPRRQ15256 657 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 PTRHD1Q6GMV3 140 aaKnown RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 LRRC8DQ7L1W4 858 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 PTGR2Q8N8N7 351 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 RTL3Q8N8U3 475 aaKnown RBP11.39□□□□□ -0.59
TOP3A-217ENST00000584582 IGSF8Q969P0 613 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 NTAN1Q96AB6 310 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 TIMM22Q9Y584 194 aa11.39□□□□□ -0.59
TOP3A-217ENST00000584582 HAS3O00219 553 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 HDAC3O15379 428 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 PIK3CGP48736 1102 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 MLLT6P55198 1093 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 SMAD3P84022 425 aaKnown RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 GALNT2Q10471 571 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 RALGDSQ12967 914 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 PRKAA1Q13131 559 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 RBBP5Q15291 538 aaKnown RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 PTPRNQ16849 979 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 LSM12Q3MHD2 195 aaKnown RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 WASHC2DQ5SRD0 308 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 OTUD1Q5VV17 481 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 MBLAC2Q68D91 279 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 IYDQ6PHW0 289 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms