RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 WIPI1Q5MNZ9 446 aaPredicted RBP6.4□□□□□ -1.38
CTC1-212ENST00000584439 C1orf220Q5T0J3 134 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 BORAQ6PGQ7 559 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 EFL1Q7Z2Z2 1120 aaKnown RBP6.4□□□□□ -1.38
CTC1-212ENST00000584439 TRAPPC11Q7Z392 1133 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 ANKS1BQ7Z6G8 1248 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 WDR49Q8IV35 697 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 NELFCDQ8IXH7 590 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 C12orf56Q8IXR9 622 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 NUP93Q8N1F7 819 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 AADATQ8N5Z0 425 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 MFSD2AQ8NA29 543 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 MYCBPAPQ8TBZ2 947 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 GANCQ8TET4 914 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 NOC3LQ8WTT2 800 aaKnown RBP6.4□□□□□ -1.38
CTC1-212ENST00000584439 PDCD6IPQ8WUM4 868 aaKnown RBP6.4□□□□□ -1.38
CTC1-212ENST00000584439 UCMAQ8WVF2 138 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 TCTN2Q96GX1 697 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 TBATAQ96M53 351 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 ZNF396Q96N95 335 aaPredicted RBP6.4□□□□□ -1.38
CTC1-212ENST00000584439 NSUN5Q96P11 429 aaKnown RBP6.4□□□□□ -1.38
CTC1-212ENST00000584439 TAAR9Q96RI9 348 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 SERINC2Q96SA4 455 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 CGRRF1Q99675 332 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.38
CTC1-212ENST00000584439 PABPC3Q9H361 631 aaKnown RBP6.4□□□□□ -1.38
CTC1-212ENST00000584439 CUEDC2Q9H467 287 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 SLC39A2Q9NP94 309 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 KLHL3Q9UH77 587 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 CDH9Q9ULB4 789 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 FRMD4BQ9Y2L6 1034 aa6.4□□□□□ -1.38
CTC1-212ENST00000584439 UBE4BO95155 1302 aa6.4□□□□□ -1.39
CTC1-212ENST00000584439 CCDC187A0A096LP49 1063 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 PRAMEF33A0A0G2JMD5 474 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 ZNF233A6NK53 670 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 K7ESM1 405 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 KIAA0391O15091 583 aaKnown RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 PRAMEF10O60809 474 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 PIAS2O75928 621 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 STC2O76061 302 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 BEST1O76090 585 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 VNN1O95497 513 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 TMEM191BP0C7N4 346 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 DLATP10515 647 aaKnown RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 HOXB4P17483 251 aaPredicted RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 ITIH1P19827 911 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 WARSP23381 471 aaKnown RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 MSX1P28360 303 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 HLA-FP30511 346 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 RNF144AP50876 292 aaPredicted RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 CYP2J2P51589 502 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 CCR5P51681 352 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 MYL6P60660 151 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 DLG4P78352 724 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 PCDH1Q08174 1060 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 PSMD6Q15008 389 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 ZNF776Q68DI1 518 aaPredicted RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 ZCCHC8Q6NZY4 707 aaKnown RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 RBM44Q6ZP01 1051 aaKnown RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 C1orf122Q6ZSJ8 110 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 PAQR9Q6ZVX9 377 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 ADIPOR2Q86V24 386 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 MMP21Q8N119 569 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 OXR1Q8N573 874 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 IQUBQ8NA54 791 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 OR2T34Q8NGX1 318 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 CACTINQ8WUQ7 758 aaKnown RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 NANOS1Q8WY41 292 aaKnown RBP6.39□□□□□ -1.39
CTC1-212ENST00000584439 CCDC127Q96BQ5 260 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 ABHD17AQ96GS6 310 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 HPDLQ96IR7 371 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 ANKRD36BP1Q96IX9 119 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 CCDC138Q96M89 665 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 CEP295NLQ96MC4 621 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 MYOCQ99972 504 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 FOXP3Q9BZS1 431 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 SDCBP2Q9H190 292 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 KCTD10Q9H3F6 313 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 SMYD3Q9H7B4 428 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 ZFAND3Q9H8U3 227 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 MAGEF1Q9HAY2 307 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 NMUR1Q9HB89 426 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 DMAC2Q9NW81 257 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 MKS1Q9NXB0 559 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 RRN3Q9NYV6 651 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 IL37Q9NZH6 218 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 FOXJ2Q9P0K8 574 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 HMGXB4Q9UGU5 601 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 RCOR1Q9UKL0 485 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 HPSEQ9Y251 543 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 GPR52Q9Y2T5 361 aa6.39□□□□□ -1.39
CTC1-212ENST00000584439 ANKRD36A6QL64 1941 aa6.38□□□□□ -1.39
CTC1-212ENST00000584439 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.38□□□□□ -1.39
CTC1-212ENST00000584439 FAM237AA0A1B0GTK4 181 aa6.38□□□□□ -1.39
CTC1-212ENST00000584439 A0A1B0GVL5 298 aa6.38□□□□□ -1.39
CTC1-212ENST00000584439 PVALEFA0A1B0GWK0 134 aa6.38□□□□□ -1.39
CTC1-212ENST00000584439 LRRIQ3A6PVS8 624 aaPredicted RBP6.38□□□□□ -1.39
CTC1-212ENST00000584439 RNF223E7ERA6 249 aa6.38□□□□□ -1.39
CTC1-212ENST00000584439 LATO43561 262 aa6.38□□□□□ -1.39
CTC1-212ENST00000584439 DLX3O60479 287 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms