RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MYL9P24844 172 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 EPHB3P54753 998 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 ITPK1Q13572 414 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 CCNIQ14094 377 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 PACS1Q6VY07 963 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 CXXC5Q7LFL8 322 aaKnown RBP13.15□□□□□ -0.31
RNF43-208ENST00000584437 SIX5Q8N196 739 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 TMEM86AQ8N2M4 240 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 SENP6Q9GZR1 1112 aaPredicted RBP13.15□□□□□ -0.31
RNF43-208ENST00000584437 RACGAP1Q9H0H5 632 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.31
RNF43-208ENST00000584437 NRP2O60462 931 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 LRIG2O94898 1065 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 OTCP00480 354 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 DDI2Q5TDH0 399 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 SAPCD2Q86UD0 394 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 ZNF410Q86VK4 478 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 SPATA20Q8TB22 786 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 EZH1Q92800 747 aaPredicted RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 CCDC3Q9BQI4 270 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 XPR1Q9UBH6 696 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 GSAPA4D1B5 854 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 DPPA5A6NC42 116 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 LOC110117498-PIK3R3F6TDL0 507 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 DHFRP00374 187 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 CRHR1P34998 444 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 TTPAP49638 278 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 GMPSP49915 693 aaPredicted RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 UGT2B15P54855 530 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 BCL2L1Q07817 233 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 RNF180Q86T96 592 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 TOR4AQ9NXH8 423 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 E9PCH4 1651 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 LMTK2Q8IWU2 1503 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 CAPN8A6NHC0 703 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 MGRN1O60291 552 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 SHMT1P34896 483 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 CRADDP78560 199 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 ABATP80404 500 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 C15orf59Q2T9L4 293 aaPredicted RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 ZFP69Q49AA0 526 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 FBXO16Q8IX29 292 aaPredicted RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 CCDC36Q8IYA8 594 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 TCAIMQ8N3R3 496 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 POMGNT2Q8NAT1 580 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 ABCC13Q9NSE7 274 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 KANSL3Q9P2N6 904 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 GNPTGQ9UJJ9 305 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 PLLPQ9Y342 182 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 G3V2T6 193 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 H3BRB1 525 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 AVILO75366 819 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 CCNKO75909 580 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 INSRRP14616 1297 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 TCF4P15884 667 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 STARP49675 285 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 MARSP56192 900 aaKnown RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 NOMO3P69849 1222 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 PAGE2Q7Z2X7 111 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 RBM15BQ8NDT2 890 aaKnown RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 NMUR2Q9GZQ4 415 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 TUT1Q9H6E5 874 aaKnown RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 SSU72Q9NP77 194 aaKnown RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 TMEM138Q9NPI0 162 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 DNAJC28Q9NX36 388 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 PTTG2Q9NZH5 202 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.14□□□□□ -0.31
RNF43-208ENST00000584437 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 OR12D3Q9UGF7 316 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 CIDEBQ9UHD4 219 aa13.14□□□□□ -0.31
RNF43-208ENST00000584437 GNEQ9Y223 722 aaKnown RBP13.14□□□□□ -0.31
RNF43-208ENST00000584437 PRG2P13727 222 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 OAZ1P54368 228 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PSMD5Q16401 504 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ADAMTSL2Q86TH1 951 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 GPR180Q86V85 440 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ZFP28Q8NHY6 868 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 SLC44A1Q8WWI5 657 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ITCHQ96J02 903 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 OSMRQ99650 979 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 OSGEPL1Q9H4B0 414 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PNPOQ9NVS9 261 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 CDH22Q9UJ99 828 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 SYNPO2Q9UMS6 1093 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 EFR3BQ9Y2G0 817 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 MRPS7Q9Y2R9 242 aaKnown RBP13.13□□□□□ -0.31
RNF43-208ENST00000584437 LYVE1Q9Y5Y7 322 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PLK4O00444 970 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 OR6A2O95222 327 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 NFKB1P19838 968 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PRDX6P30041 224 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PLET1Q6UQ28 207 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ITIH5Q86UX2 942 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 CAMKK1Q8N5S9 505 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms