RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 PCDHA13Q9Y5I0 950 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 ZNF487B1APH4 448 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 WNT9AO14904 365 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 INSIG1O15503 277 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 FLRT2O43155 660 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 MAFKO60675 156 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 PRLRP16471 622 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 KDELR1P24390 212 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 ABL2P42684 1182 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 ARRB1P49407 418 aaPredicted RBP27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 HADHBP55084 474 aaKnown RBP27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 NXPH1P58417 271 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 BCL2L1Q07817 233 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 SLC10A7Q0GE19 358 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 INAVAQ3KP66 663 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 SEL1L3Q68CR1 1132 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 TIGD7Q6NT04 549 aaPredicted RBP27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 CPNE8Q86YQ8 564 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 NAXDQ8IW45 347 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 TP53INP2Q8IXH6 220 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 RHOT1Q8IXI2 618 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 PAF1Q8N7H5 531 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 PCDH19Q8TAB3 1148 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 ASB12Q8WXK4 309 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 KLK6Q92876 244 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 FAF2Q96CS3 445 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 CALR3Q96L12 384 aaKnown RBP27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 KLHL11Q9NVR0 708 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 DDX56Q9NY93 547 aaKnown RBP27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 EPN1Q9Y6I3 576 aaPredicted RBP27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 PI4KAP42356 2102 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 DCHS1Q96JQ0 3298 aa27.47■■□□□ 1.99
SMARCD2-210ENST00000584400 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 LRRD1A4D1F6 860 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 H0Y8X5 98 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 AREL1O15033 823 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 SPOPO43791 374 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 PCDHGA12O60330 932 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 PIGNO95427 931 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 MX2P20592 715 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 SCNN1BP51168 640 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 POLR2LP62875 67 aaKnown RBP27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 MARC1Q5VT66 337 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 NCBP2-AS2Q69YL0 99 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 ERAP2Q6P179 960 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 CXorf40AQ8TE69 158 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 SETD7Q8WTS6 366 aaKnown RBP27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 MAK16Q9BXY0 300 aaKnown RBP27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 IMPACTQ9P2X3 320 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 HS3ST3A1Q9Y663 406 aa27.46■■□□□ 1.99
SMARCD2-210ENST00000584400 A0A0A6YYK5 440 aaPredicted RBP27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 A0A1B0GTQ1 180 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 A0A1W2PQ67 120 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 TSPAN11A1L157 253 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 GOLGA6L6A8MZA4 724 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 SH3BP5O60239 455 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 PAK4O96013 591 aaPredicted RBP27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 TIMP2P16035 220 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 FECHP22830 423 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 GALNT2Q10471 571 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 UGP2Q16851 508 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 RALGPS1Q5JS13 557 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 N4BP2L1Q5TBK1 243 aaPredicted RBP27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 DBX2Q6ZNG2 339 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 ZNF830Q96NB3 372 aaPredicted RBP27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 LENG8Q96PV6 779 aaPredicted RBP27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 C1QTNF7Q9BXJ2 289 aa27.45■■□□□ 1.98
SMARCD2-210ENST00000584400 KCNK3O14649 394 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 NDUFA10O95299 355 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 CDC25BP30305 580 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 GARSP41250 739 aaKnown RBP27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 MMP13P45452 471 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 RGRP47804 291 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 IFI16Q16666 785 aaKnown RBP27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 CAMK1DQ8IU85 385 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 RAPGEF5Q92565 580 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 RNF157Q96PX1 679 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 MYOCQ99972 504 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 C1QTNF2Q9BXJ5 285 aa27.44■■□□□ 1.98
SMARCD2-210ENST00000584400 IGLON5A6NGN9 336 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 A6NNZ2 444 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 FPGTO14772 594 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 GIPC1O14908 333 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 MFSD11O43934 449 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 TM7SF2O76062 418 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 PEX11BO96011 259 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 THEGLP0DJG4 465 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 COMTP21964 271 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 DCP2Q8IU60 420 aaKnown RBP27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 DENND6BQ8NEG7 585 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 MGME1Q9BQP7 344 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 ITM2BQ9Y287 266 aa27.43■■□□□ 1.98
SMARCD2-210ENST00000584400 ADAMTS9Q9P2N4 1935 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 SOWAHDA6NJG2 315 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 BUB1BO60566 1050 aaPredicted RBP27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 KRT1P04264 644 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 ZFXP17010 805 aaPredicted RBP27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 CCNCP24863 283 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 NFKBIAP25963 317 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms