RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 TMEM164Q5U3C3 297 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 OTUD1Q5VV17 481 aaPredicted RBP13.54□□□□□ -0.24
COPS3-218ENST00000584216 TRIM65Q6PJ69 517 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 OR2AP1Q8NGE2 309 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 TIGD1Q96MW7 591 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 EPAS1Q99814 870 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 EDEM3Q9BZQ6 932 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 B3GNT4Q9C0J1 378 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 SLC25A18Q9H1K4 315 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 LRRN3Q9H3W5 708 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 AKAP7Q9P0M2 348 aaPredicted RBP13.54□□□□□ -0.24
COPS3-218ENST00000584216 PPARGC1AQ9UBK2 798 aaKnown RBP13.54□□□□□ -0.24
COPS3-218ENST00000584216 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
COPS3-218ENST00000584216 COL27A1Q8IZC6 1860 aaPredicted RBP13.54□□□□□ -0.24
COPS3-218ENST00000584216 BECN2A8MW95 431 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 AREL1O15033 823 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 UGT2B4P06133 528 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 HGFP14210 728 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 SUOXP51687 545 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 CCL7P80098 99 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 NFKB2Q00653 900 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 MORC3Q14149 939 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 TBR1Q16650 682 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 PTPN20Q4JDL3 420 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 HID1Q8IV36 788 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 MSANTD4Q8NCY6 345 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 OR6K2Q8NGY2 324 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 SHC3Q92529 594 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 ARHGEF2Q92974 986 aaKnown RBP13.53□□□□□ -0.24
COPS3-218ENST00000584216 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 PDCL3Q9H2J4 239 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 ADNPQ9H2P0 1102 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 GDPD2Q9HCC8 539 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 ANLNQ9NQW6 1124 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 GEMIN8Q9NWZ8 242 aaKnown RBP13.53□□□□□ -0.24
COPS3-218ENST00000584216 GGT7Q9UJ14 662 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 APPL1Q9UKG1 709 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 CTNND2Q9UQB3 1225 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 ZDHHC9Q9Y397 364 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 SNX10Q9Y5X0 201 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 PIEZO2Q9H5I5 2752 aa13.53□□□□□ -0.24
COPS3-218ENST00000584216 A0A1W2PQM1 296 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 ZSCAN5CA6NGD5 496 aaPredicted RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 I6L893 689 aaPredicted RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 MMP20O60882 483 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 PNLIPP16233 465 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 GLB1P16278 677 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 XPAP23025 273 aaPredicted RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 MAPKAPK2P49137 400 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 BPIFB4P59827 614 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 TLE1Q04724 770 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 ELP6Q0PNE2 266 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 PAK1Q13153 545 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 LRRC14Q15048 493 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 MYLK3Q32MK0 819 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 FAM102AQ5T9C2 384 aaPredicted RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 ISM2Q6H9L7 571 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 GDPD4Q6W3E5 623 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 GBP6Q6ZN66 633 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 ELOA2Q8IYF1 753 aaPredicted RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 TMEM35BQ8NCS4 154 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 GDAP1L1Q96MZ0 367 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 TBCBQ99426 244 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 ANKMY1Q9P2S6 941 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 ZNF212Q9UDV6 495 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 RABGEF1Q9UJ41 708 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 MAN1B1Q9UKM7 699 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 PNMA8BQ9ULN7 279 aaPredicted RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 TDRD6O60522 2096 aaKnown RBP13.52□□□□□ -0.25
COPS3-218ENST00000584216 DOCK9Q9BZ29 2069 aa13.52□□□□□ -0.25
COPS3-218ENST00000584216 TRPM6Q9BX84 2022 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 PRAMEF33A0A0G2JMD5 474 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 CASC3O15234 703 aaKnown RBP13.51□□□□□ -0.25
COPS3-218ENST00000584216 ZW10O43264 779 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 PRAMEF10O60809 474 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 TFE3P19532 575 aaPredicted RBP13.51□□□□□ -0.25
COPS3-218ENST00000584216 GKP32189 559 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 ATP1A2P50993 1020 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 SRP54P61011 504 aaKnown RBP13.51□□□□□ -0.25
COPS3-218ENST00000584216 ZFP36L1Q07352 338 aaKnown RBP13.51□□□□□ -0.25
COPS3-218ENST00000584216 NFATC4Q14934 902 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 IRF4Q15306 451 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 EXOC3L4Q17RC7 722 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 ALG11Q2TAA5 492 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 ENPP7Q6UWV6 458 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 CASKIN2Q8WXE0 1202 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 C18orf8Q96DM3 657 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 CRACR2AQ9BSW2 395 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 MAGEH1Q9H213 219 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 MBNL1Q9NR56 388 aaKnown RBP13.51□□□□□ -0.25
COPS3-218ENST00000584216 DKK3Q9UBP4 350 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 KLQ9UEF7 1012 aa13.51□□□□□ -0.25
COPS3-218ENST00000584216 UBR5O95071 2799 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms