RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 C1QTNF3-AMACRE9PGA6 284 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 PCDHGA12O60330 932 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 RNASEH2AO75792 299 aaKnown RBP25.21■■□□□ 1.63
TSEN54-209ENST00000583454 PRNPP04156 253 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 WNT1P04628 370 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 DRD3P35462 400 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 CCNHP51946 323 aaPredicted RBP25.21■■□□□ 1.63
TSEN54-209ENST00000583454 METAP1P53582 386 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 RACK1P63244 317 aaKnown RBP25.21■■□□□ 1.63
TSEN54-209ENST00000583454 KIF5AQ12840 1032 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 NCBP2-AS2Q69YL0 99 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 DAAM2Q86T65 1068 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 PROSER1Q86XN7 944 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 OR2AP1Q8NGE2 309 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 RHBDD1Q8TEB9 315 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 GANCQ8TET4 914 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 VOPP1Q96AW1 172 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 CDC6Q99741 560 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 OMDQ99983 421 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 HEPHQ9BQS7 1158 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 TM6SF2Q9BZW4 377 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 HECAQ9UBI9 543 aaPredicted RBP25.21■■□□□ 1.63
TSEN54-209ENST00000583454 IL36AQ9UHA7 158 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 A0A0U1RQJ8 604 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 WNT9AO14904 365 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 VILLO15195 856 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 CCT8P50990 548 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 SNRPD1P62314 119 aaKnown RBP25.2■■□□□ 1.62
TSEN54-209ENST00000583454 ARSIQ5FYB1 569 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 LRRC49Q8IUZ0 686 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 OR2T34Q8NGX1 318 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 SP110Q9HB58 689 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 LHX3Q9UBR4 397 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 ARID1BQ8NFD5 2236 aaPredicted RBP25.2■■□□□ 1.62
TSEN54-209ENST00000583454 ADAMTS20P59510 1910 aa25.2■■□□□ 1.62
TSEN54-209ENST00000583454 RNF103O00237 685 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 MAFKO60675 156 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 TNNT1P13805 278 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 ADPRHP54922 357 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 RFTN1Q14699 578 aaPredicted RBP25.19■■□□□ 1.62
TSEN54-209ENST00000583454 TAZQ16635 292 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 MYLK3Q32MK0 819 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 KATNAL2Q8IYT4 538 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 LRRC57Q8N9N7 239 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 KIAA1524Q8TCG1 905 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 LRIG1Q96JA1 1093 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 ZNF599Q96NL3 588 aa25.19■■□□□ 1.62
TSEN54-209ENST00000583454 SHROOM3Q8TF72 1996 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 A0A1B0GTQ1 180 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 A0A1W2PR77 199 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 LRRC72A6NJI9 287 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 MFSD11O43934 449 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 LEFTY1O75610 366 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 POP4O95707 220 aaKnown RBP25.18■■□□□ 1.62
TSEN54-209ENST00000583454 PEX11BO96011 259 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 KRT1P04264 644 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 CCR5P51681 352 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 NAP1L1P55209 391 aaKnown RBP25.18■■□□□ 1.62
TSEN54-209ENST00000583454 RHOAP61586 193 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 CCZ1BP86790 482 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 CCZ1P86791 482 aaPredicted RBP25.18■■□□□ 1.62
TSEN54-209ENST00000583454 CNTN1Q12860 1018 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 SUZ12Q15022 739 aaKnown RBP25.18■■□□□ 1.62
TSEN54-209ENST00000583454 SHBQ15464 509 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 ATXN7L2Q5T6C5 722 aaPredicted RBP25.18■■□□□ 1.62
TSEN54-209ENST00000583454 TMPRSS7Q7RTY8 843 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 GRIN3AQ8TCU5 1115 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 RNF25Q96BH1 459 aaPredicted RBP25.18■■□□□ 1.62
TSEN54-209ENST00000583454 GDAP1L1Q96MZ0 367 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 TRIM10Q9UDY6 481 aa25.18■■□□□ 1.62
TSEN54-209ENST00000583454 GRID2IPA4D2P6 1211 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 KPNA3O00505 521 aaPredicted RBP25.17■■□□□ 1.62
TSEN54-209ENST00000583454 SLC7A4O43246 635 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 PALMO75781 387 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 GRK6P43250 576 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 IL9RQ01113 521 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 GALNT2Q10471 571 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 IFI16Q16666 785 aaKnown RBP25.17■■□□□ 1.62
TSEN54-209ENST00000583454 SLC9A4Q6AI14 798 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 MFSD7Q6UXD7 560 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.17■■□□□ 1.62
TSEN54-209ENST00000583454 ARRDC3Q96B67 414 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 HDAC8Q9BY41 377 aa25.17■■□□□ 1.62
TSEN54-209ENST00000583454 PLK4O00444 970 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 LATO43561 262 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 IGSF6O95976 241 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 CDKN2BP42772 138 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 CSNK1DP48730 415 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 MARCKSL1P49006 195 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 PPP2CBP62714 309 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 PPP2CAP67775 309 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 GBE1Q04446 702 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 SLC10A2Q12908 348 aaPredicted RBP25.16■■□□□ 1.62
TSEN54-209ENST00000583454 POM121L1PQ3SYA9 428 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 TMCO4Q5TGY1 634 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 AGBL4Q5VU57 503 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 ADAT2Q7Z6V5 191 aaKnown RBP25.16■■□□□ 1.62
TSEN54-209ENST00000583454 RYBPQ8N488 228 aaPredicted RBP25.16■■□□□ 1.62
TSEN54-209ENST00000583454 ATPAF2Q8N5M1 289 aa25.16■■□□□ 1.62
TSEN54-209ENST00000583454 PLD5Q8N7P1 536 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms